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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG061890
Reference: TK1151 Chr: ChrUn Coordinates: 17938513-17941947 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2671 bp · TkAUNG061890|TK1151|cDNA

TCTTCTTGCCAACGTTCAAATGTTCTTTACTCTATCGCGGCGAAGAAGAACACTAGGATAGCCGGATCTGCTTCTTTTCTCAACTTTCATTAGTCAATTCGAAGAACATGGAATCTCGTCAATGGTGTCGTATTTTAATTTTTTAGAACATCTCATCAGGAGTCAATCAGTTAAGTTACTTGCATATCAAAATCAAAATCCAAGATTCAAGCTCTGAGTATTTCTTTGAAATCATTTATTGAATAAGCAAGGAGTTCTCA...

CDS

Download CDS FASTA

1440 bp · TkAUNG061890|TK1151|CDS

ATGATTCTTCACCTCCTCCTTTTCTCTGTGATTCTGGTACTCGCATCCTCATCAGTATCTGTCGGAGCAAATTGCAATCGCGTTTGTAAAGGAAGTAGTCGCGATATCGCAGTTCCTTTCCCGTTTGGATTCTCCGACGATTGCGAAGTTAGTATTGAATGTACGGATACCGGACAATTCCGTATTGCCAACTACACGGTTCTGAATCTAACCAGAGACCATATAGTGATTAATTTACCAGCTAAATGCGACCGCCCGTT...

Protein

Download Protein FASTA

479 aa · TkAUNG061890|TK1151|PROTEIN

MILHLLLFSVILVLASSSVSVGANCNRVCKGSSRDIAVPFPFGFSDDCEVSIECTDTGQFRIANYTVLNLTRDHIVINLPAKCDRPFGEIRRLIRNRNYALTSRNGLLLGNCSESLNNCSVSTRIIQGYFNLSTCGLANNSLHCYSDDNLGHEFINLLDFKAAGCRVLYSSITVVLEESSTQRSSLMMGFQSVELGWWVPGDCHCHHHAGCKNISYNNARVGYRCHCNNGYDGDGFVNGDGCRRVSNCNATKYISGECGG...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG061890
TK1151 IDTkAUNG061890
OH-1004 IDLXL04_024270
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)63.600
Protein coverage (%)TK1151 99.791 / OH-1004 67.938
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG061890
LocationChrUn:17938513-17941947 (-)
DescriptionSimilar to WAKL14: Wall-associated receptor kinase-like 14
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g23450 Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. No verified direct reference in this release
At5g66790 Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. No verified direct reference in this release
At3g53840 Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. No verified direct reference in this release
At5g02070 Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_024270 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007166 cell surface receptor signaling pathway Biological Process
GO:0010089 xylem development Biological Process
GO:0042631 cellular response to water deprivation Biological Process
GO:0048573 photoperiodism, flowering Biological Process
GO:0071215 cellular response to abscisic acid stimulus Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0030247 polysaccharide binding Molecular Function
GO:0044589 pectin binding Molecular Function
KEGG gene cross-reference
ath:AT1G18390
ath:AT1G25390
ath:AT2G23450
ath:AT5G02070
ath:AT5G66790
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.863
Rank 1 · TkAUNG061890 · TK1151
Endoplasmic reticulum0.077
Rank 2 · TkAUNG061890 · TK1151
Cytoplasm0.075
Rank 3 · TkAUNG061890 · TK1151
Nucleus0.046
Rank 4 · TkAUNG061890 · TK1151
Lysosome / Vacuole0.029
Rank 5 · TkAUNG061890 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13947GUB_WAK_bind29-74 aa
PF12947EGF_346-59 aa
PF12947EGF_3112-121 aa
PF13947GUB_WAK_bind130-157 aa
PF12947EGF_3204-236 aa
PF00008EGF205-234 aa
PF12662cEGF222-235 aa
PF12947EGF_3238-258 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkAUNG061890PF13947GUB_WAK_bind29740.01516.4
TkAUNG061890PF12947EGF_346590.003618.2
TkAUNG061890PF12947EGF_31121210.003618.2
TkAUNG061890PF13947GUB_WAK_bind1301570.01516.4
TkAUNG061890PF12947EGF_32042360.003618.2
TkAUNG061890PF00008EGF2052340.1213.4
TkAUNG061890PF12662cEGF2222350.04214.4
TkAUNG061890PF12947EGF_32382580.003618.2
TkAUNG061890PF15069FAM1632642860.7310.9
TkAUNG061890PF00069Pkinase3284751.4e-31110.6
TkAUNG061890PF07714PK_Tyr_Ser-Thr3314752.8e-31109.5
TkAUNG061890PF03109ABC13333590.01315.4
TkAUNG061890PF00008EGF3883940.1213.4
TkAUNG061890PF03109ABC13954750.01315.4

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8RY67Arabidopsis thalianasp|Q8RY67|WAKLO_ARATH Wall-associated receptor kinase-like 1445.300%Swiss-ProtMedium
Q8GYF5Arabidopsis thalianasp|Q8GYF5|WAKLR_ARATH Wall-associated receptor kinase-like 2142.000%Swiss-ProtMedium
Q9M342Arabidopsis thalianasp|Q9M342|WAKLP_ARATH Wall-associated receptor kinase-like 1539.000%Swiss-ProtMedium
Q9LZM4Arabidopsis thalianasp|Q9LZM4|WAKLQ_ARATH Wall-associated receptor kinase-like 2031.800%Swiss-ProtMedium

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