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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G002730
Reference: TK1151 Chr: Chr07 Coordinates: 714668-717613 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1496 bp · TkA07G002730|TK1151|cDNA

TCTAAGTCCATTTCAACTGCACAAAAAGATTGAAAAAAAAGTCGAAGTCTTCACGGACTTCCATACCCAATTACAGTTCAAAAGTTCACAATTCTTTTTCAAATGTCAATGTCCCGTCTTCTTCCTTCTCCTTCCCCCAATTTCATCTCTTCTGGGGTGAATTTCCTTCACAAACACCGAGAGAATCCATGTCTGTAATGGAATCTAGCTCTACTACTATTACAGCAGAGCAGCAGAACCATATCAAAGGAATACTCACA...

CDS

Download CDS FASTA

1140 bp · TkA07G002730|TK1151|CDS

ATGTCTGTAATGGAATCTAGCTCTACTACTATTACAGCAGAGCAGCAGAACCATATCAAAGGAATACTCACACATGGTGGCCGTTACATCCAGTACAATATCTACGGTAACCTTTTCGAAGTTTCTCGAAAGTATGTTCCTCCGATCCGTCCTGTTGGTAGAGGAGCTTACGGAATTGTCTGTGCTGCAATGAATGCGGAAACACGTGAAGAAGTTGCAGTTAAGAAAATCGGTAACGCATTCGACAACAGAATAGATGC...

Protein

Download Protein FASTA

379 aa · TkA07G002730|TK1151|PROTEIN

MSVMESSSTTITAEQQNHIKGILTHGGRYIQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNAETREEVAVKKIGNAFDNRIDAKRTLREIKLLRHMDHENVIAIKDIIRPPQKENFNDVYIVYELMDTDLHQIIRSNQPLADDHCRYFLYQILRGLKYVHSAHVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEILTRQPLFPGKDYVHQLRLIT...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G002730
TK1151 IDTkA07G002730
OH-1004 IDLXL04_022619
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)94.500
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G002730
LocationChr07:714668-717613 (-)
DescriptionSimilar to MPK4: Mitogen-activated protein kinase 4
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g01370 The ANPs-MKK6-MPK4 module is involved in the regulation of plant cytokinesis during meiosis and mitosis.
Arabidopsis map kinase 4 negatively regulates systemic acquired resistance.2000 · DOI: 10.1016/s0092-8674(00)00213-0
The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis.2004 · DOI: 10.1016/j.molcel.2004.06.023
Involvement of MPK4 in osmotic stress response pathways in cell suspensions and plantlets of Arabidopsis thaliana: activation by hypoosmolarity and negative role in hyperosmolarity tolerance.2004 · DOI: 10.1016/j.febslet.2004.08.001
The MAP kinase substrate MKS1 is a regulator of plant defense responses.2005 · DOI: 10.1038/sj.emboj.7600737
Arabidopsis homologs of nucleus- and phragmoplast-localized kinase 2 and 3 and mitogen-activated protein kinase 4 are essential for microtubule organization.2010 · DOI: 10.1105/tpc.109.071746
HINKEL kinesin, ANP MAPKKKs and MKK6/ANQ MAPKK, which phosphorylates and activates MPK4 MAPK, constitute a pathway that is required for cytokinesis in Arabidopsis thaliana.2010 · DOI: 10.1093/pcp/pcq135
The MAP kinase MPK4 is required for cytokinesis in Arabidopsis thaliana.2010 · DOI: 10.1105/tpc.110.077164
AtMPK4 is required for male-specific meiotic cytokinesis in Arabidopsis.2011 · DOI: 10.1111/j.1365-313x.2011.04642.x
The MEKK1-MKK1/MKK2-MPK4 kinase cascade negatively regulates immunity mediated by a mitogen-activated protein kinase kinase kinase in Arabidopsis.2012 · DOI: 10.1105/tpc.112.097253
Phosphorylation of trihelix transcriptional repressor ASR3 by MAP KINASE4 negatively regulates Arabidopsis immunity.2015 · DOI: 10.1105/tpc.114.134809
A Dominant Mutation in the HT1 Kinase Uncovers Roles of MAP Kinases and GHR1 in CO2-Induced Stomatal Closure.2016 · DOI: 10.1105/tpc.16.00131
At1g01560 Mitogen-activated protein kinase 11. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os08g0157000 Mitogen-activated protein kinase 2. No verified direct reference in this release
Os10g0533600 Mitogen-activated protein kinase 6. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_022619 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000911 cytokinesis by cell plate formation Biological Process
GO:0006468 protein phosphorylation Biological Process
GO:0006972 hyperosmotic response Biological Process
GO:0007112 male meiosis cytokinesis Biological Process
GO:0007165 signal transduction Biological Process
GO:0009409 response to cold Biological Process
GO:0009555 pollen development Biological Process
GO:0009620 response to fungus Biological Process
GO:0009651 response to salt stress Biological Process
GO:0009737 response to abscisic acid Biological Process
GO:0009861 jasmonic acid and ethylene-dependent systemic resistance Biological Process
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway Biological Process
KEGG gene cross-reference
ath:AT1G01560
ath:AT4G01370
dosa:Os08g0157000
dosa:Os10g0533600
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.622
Rank 1 · TkA07G002730 · TK1151
Nucleus0.539
Rank 2 · TkA07G002730 · TK1151
Cell membrane0.089
Rank 3 · TkA07G002730 · TK1151
Mitochondrion0.045
Rank 4 · TkA07G002730 · TK1151
Endoplasmic reticulum0.027
Rank 5 · TkA07G002730 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00069Pkinase50-332 aa
PF07714PK_Tyr_Ser-Thr50-243 aa
PF01163RIO181-194 aa
PF06293Kdo82-184 aa
PF03109ABC1116-149 aa
PF12330Haspin_kinase123-200 aa
PF14531Kinase-like138-234 aa
PF03109ABC1163-200 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G002730PF00069Pkinase503323.5e-69233.9
TkA07G002730PF07714PK_Tyr_Ser-Thr502439e-33114.4
TkA07G002730PF01163RIO1811940.04114.2
TkA07G002730PF06293Kdo821848.5e-0522.8
TkA07G002730PF03109ABC11161490.004616.9
TkA07G002730PF12330Haspin_kinase1232000.1312.0
TkA07G002730PF14531Kinase-like1382340.02214.7
TkA07G002730PF03109ABC11632000.004616.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q39024Arabidopsis thalianasp|Q39024|MPK4_ARATH Mitogen-activated protein kinase 487.800%Swiss-ProtHigh
Q9LMM5Arabidopsis thalianasp|Q9LMM5|MPK11_ARATH Mitogen-activated protein kinase 1185.700%Swiss-ProtHigh
Q5J4W4Oryza sativa subsp. japonicasp|Q5J4W4|MPK2_ORYSJ Mitogen-activated protein kinase 285.600%Swiss-ProtHigh
Q336X9Oryza sativa subsp. japonicasp|Q336X9|MPK6_ORYSJ Mitogen-activated protein kinase 681.600%Swiss-ProtHigh

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