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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA04G306370
Reference: TK1151 Chr: Chr04 Coordinates: 77333665-77344037 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2329 bp · TkA04G306370|TK1151|cDNA

CTGTAATTTACTCTGGAATAAATAAAGTAGAAACGAACACCTTATGCAAAACTCCTAATATTTGGCAGACTCTCAATGGACACAAAACAAAGCACATTTCTTTTTTCACAAGATGAAGGTGGACAACATAAAGACTCTCAAAAAGTCAAAATCGCTGACTTCCTACTTCCTTCTTCCTCTTGACCACATTCGACCCAATCAAACCGCGTACAGTTTCTTGGAAGATTCCATTCTTTTAAATCTTGACGATTTCAAGTATT...

CDS

Download CDS FASTA

1569 bp · TkA04G306370|TK1151|CDS

ATGGGGCTATGCAGTAGCAAAAGCAAGAGTGGAGGGACATACCCAGATGCTCACAGACCAAGATCCGTCGAACCCAAAATAGTTTACAGCAAATCGCCAGCTCCGGCAGCCCAAATTCCGGCGAGAAAGCAACACCAGCCGCCGCCGCCCAGCCCCAAAAGGATATTCAAAGCCGACCCAAACTCAATTATCGGCAAACCATTTGAAGATGTTAAACAACACTACACAATGGGGAAAGAATTGGGTAGAGGTCAATTTGG...

Protein

Download Protein FASTA

522 aa · TkA04G306370|TK1151|PROTEIN

MGLCSSKSKSGGTYPDAHRPRSVEPKIVYSKSPAPAAQIPARKQHQPPPPSPKRIFKADPNSIIGKPFEDVKQHYTMGKELGRGQFGVTYLCIEKSTGHKYACKSISKKKLVTKSDKDDMRKEIQIMQHLSGQANIVEFKGAYEDKQSVHLVMEVCEGGELFDRIIAEGHYSERAAASICRSIVNVVHVCHFMGVMHRDLKPENFLLSDKSEKALLKATDFGLSVFIQEGKAYRQVVGSAYYVAPEVLTRKYGKEIDIWS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA04G306370
TK1151 IDTkA04G306370
OH-1004 IDLXL04_037425
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)97.100
Protein coverage (%)TK1151 99.808 / OH-1004 40.015
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA04G306370
LocationChr04:77333665-77344037 (-)
DescriptionSimilar to CPK9: Calcium-dependent protein kinase 9
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g20410 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release
At1g50700 Ca(2+)-dependent protein kinase.
THI1, a Thiamine Thiazole Synthase, Interacts with Ca2+-Dependent Protein Kinase CPK33 and Modulates the S-Type Anion Channels and Stomatal Closure in Arabidopsis.2016 · DOI: 10.1104/pp.15.01649
At4g04720 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0515100 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_037425 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007165 signal transduction Biological Process
GO:0035556 intracellular signal transduction Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0004683 calcium/calmodulin-dependent protein kinase activity Molecular Function
GO:0005509 calcium ion binding Molecular Function
GO:0005516 calmodulin binding Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0009931 calcium-dependent protein serine/threonine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT1G50700
ath:AT3G20410
dosa:Os07g0515100
osa:4343373
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.486
Rank 1 · TkA04G306370 · TK1151
Cytoplasm0.441
Rank 2 · TkA04G306370 · TK1151
Nucleus0.221
Rank 3 · TkA04G306370 · TK1151
Golgi apparatus0.086
Rank 4 · TkA04G306370 · TK1151
Endoplasmic reticulum0.061
Rank 5 · TkA04G306370 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF14531Kinase-like73-132 aa
PF00069Pkinase75-333 aa
PF07714PK_Tyr_Ser-Thr76-329 aa
PF23564EF-hand_FSTL1114-133 aa
PF06293Kdo147-213 aa
PF03109ABC1150-230 aa
PF14531Kinase-like172-286 aa
PF03250Tropomodulin200-221 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA04G306370PF14531Kinase-like731320.0009919.2
TkA04G306370PF00069Pkinase753337e-78262.4
TkA04G306370PF07714PK_Tyr_Ser-Thr763295.4e-29102.0
TkA04G306370PF23564EF-hand_FSTL11141336.9e-0627.2
TkA04G306370PF06293Kdo1472130.0005820.1
TkA04G306370PF03109ABC11502300.002817.6
TkA04G306370PF14531Kinase-like1722860.0009919.2
TkA04G306370PF03250Tropomodulin2002210.09513.3
TkA04G306370PF13833EF-hand_82842951.7e-1763.6
TkA04G306370PF06293Kdo3523690.0005820.1
TkA04G306370PF03250Tropomodulin3573930.09513.3
TkA04G306370PF10591SPARC_Ca_bdg3654393.1e-0834.6
TkA04G306370PF13833EF-hand_83674011.7e-1763.6
TkA04G306370PF21008AIF-13714412.3e-0835.1
TkA04G306370PF25825SAPC2_N3734230.0005620.4
TkA04G306370PF25578EF-hand_STIM13734010.00218.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q38868Arabidopsis thalianasp|Q38868|CDPK9_ARATH Calcium-dependent protein kinase 978.100%Swiss-ProtHigh
Q9C6P3Arabidopsis thalianasp|Q9C6P3|CDPKX_ARATH Calcium-dependent protein kinase 3378.400%Swiss-ProtHigh
Q9ZSA2Arabidopsis thalianasp|Q9ZSA2|CDPKL_ARATH Calcium-dependent protein kinase 2175.900%Swiss-ProtHigh
P53683Oryza sativa subsp. japonicasp|P53683|CDPKJ_ORYSJ Calcium-dependent protein kinase 1970.500%Swiss-ProtHigh

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