Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2344 bp · LXL04_026261|LXL04_026261|OH1004|cDNA
TGGGAGTTTGACGTGAAAGACCTTAGACGGAGGGGTGCTCGGAGTGTGCTCAATAAAAATCAAATCTAACATCGCCAACTTGGCCGAAGCTTTTCTTGGACTTCCGACACCGACCGAGGACTCCACACCTCACACTCCATGCCATCAACTTACTTTCAGATCACCATCTAAGACCTCTCCTGCTGTGTTTATCGGCGGTATGGGCGGCGGTCAGAAGAGCTACACCACCAATCCAGACGATTACAAGCTTTTAGAAGAAG...
2265 bp · LXL04_026261|LXL04_026261|OH1004|CDS
TTGGCCGAAGCTTTTCTTGGACTTCCGACACCGACCGAGGACTCCACACCTCACACTCCATGCCATCAACTTACTTTCAGATCACCATCTAAGACCTCTCCTGCTGTGTTTATCGGCGGTATGGGCGGCGGTCAGAAGAGCTACACCACCAATCCAGACGATTACAAGCTTTTAGAAGAAGTAGGTTACGGCGCCAGCGCCACCGTCTACAGAGCGATCTATCTCCCTTCCAATGACGTCGTCGCCGTTAAGTGCTTGGA...
Protein
Download Protein FASTA754 aa · LXL04_026261|LXL04_026261|OH1004|PROTEIN
MAEAFLGLPTPTEDSTPHTPCHQLTFRSPSKTSPAVFIGGMGGGQKSYTTNPDDYKLLEEVGYGASATVYRAIYLPSNDVVAVKCLDLDRCNSNLDDIRREAQTMSLIDHPNVIRAFCSFVVKQNLWVVMPFMAEGSCLHLMKTAYPDGFEESAIASILKETLKALEYLHRHGHIHRDVKAGNILLDTNGVIKLGDFGVSACMFDRGDRQRSRNTFVGTPCWMAPEVLQPGSGYDFKADIWSFGITALELAHGHAPFSKY...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_026261 |
|---|---|
| TK1151 ID | TkA06G017360 |
| OH-1004 ID | LXL04_026261 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 94.695Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_026261 |
|---|---|
| Location | Chr05:124056003-124060971 (+) |
| Description | Similar to fray2: Serine/threonine-protein kinase fray2 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006468 protein phosphorylation Biological Process GO:0006611 protein export from nucleus Biological Process GO:0006884 cell volume homeostasis Biological Process GO:0006979 response to oxidative stress Biological Process GO:0007165 signal transduction Biological Process GO:0007231 osmosensory signaling pathway Biological Process GO:0009410 response to xenobiotic stimulus Biological Process GO:0035556 intracellular signal transduction Biological Process GO:0038116 chemokine (C-C motif) ligand 21 signaling pathway Biological Process GO:0038146 chemokine (C-X-C motif) ligand 12 signaling pathway Biological Process GO:0046777 protein autophosphorylation Biological Process GO:0070294 renal sodium ion absorption Biological Process |
| KEGG gene cross-reference | ddi:DDB_G0276577 hsa:9943 pon:100174028 ssc:397618 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00069.32Pkinase55-316 aaPF07714.24PK_Tyr_Ser-Thr56-312 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_026261 | PF00069.32 | Pkinase | 55 | 316 | 2.9e-62 | 211.2 |
| LXL04_026261 | PF07714.24 | PK_Tyr_Ser-Thr | 56 | 312 | 2.3e-45 | 155.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.