共表达

已接入 TKU 统一模型 v4 的 TPM 和独立 OH-1004 数据集;各研究分别计算 log2(TPM+1) Pearson 候选相关,不合并不同研究的样本。两样本研究排除,旧 TK1151 缓存保持隔离。

证据边界:全部数据视图不是把不同项目和不同参考版本强行合并成一个矩阵,而是逐个 RNA-seq 数据集独立计算 log2(value+1) 的 Pearson 相关,再汇总展示候选伙伴。结果只能说明表达模式相似,不能证明调控、互作或因果关系。

数据概览

可用表达矩阵
22
当前范围
PRJNA745038_MeJA_laticifer_RNAseq
纳入查询的数据集
1
候选结果行
200

本页只汇总当前可用目录中的共表达结果,各研究分别计算,不跨数据集混合样本。仅 3 个样本的相关系数尤其不稳定,不应作为高置信调控证据。TKU 采用每基因、每研究前 200 个候选伙伴的查询缓存,不等同于全库两两网络或实验调控证据。

查询基因与代表表达向量

输入 ID
LXL04_000258
原始 ID
LXL04_000258
TK1151
-
OH-1004
LXL04_000258
代表矩阵 ID
LXL04_000258
代表向量 SD
9 / 0.531
0小时 MeJA 乳管 重复1
SRR15094077
630.000
0小时 MeJA 乳管 重复2
SRR15094076
511.000
0小时 MeJA 乳管 重复3
SRR15094075
495.000
6小时 MeJA 乳管 重复1
SRR15094074
889.000
6小时 MeJA 乳管 重复2
SRR15094073
1166.000
6小时 MeJA 乳管 重复3
SRR15094072
1387.000
24小时 MeJA 乳管 重复1
SRR15094071
810.000
24小时 MeJA 乳管 重复2
SRR15094070
1179.000
24小时 MeJA 乳管 重复3
SRR15094069
872.000

候选共表达伙伴汇总

LXL04_017793
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.996
LXL04_000282
PRJNA745038_MeJA_laticifer_RNAseq
r=0.990
LXL04_030528
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.990
LXL04_006853
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.988
LXL04_007050
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.985
LXL04_028590
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.985
LXL04_000814
PRJNA745038_MeJA_laticifer_RNAseq
r=0.985
LXL04_033516
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.985
LXL04_013368
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.984
LXL04_005174
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.983
LXL04_014676
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.983
LXL04_019660
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.982
LXL04_033963
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.982
LXL04_018722
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.981
LXL04_036545
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.981
LXL04_036959
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.980
LXL04_012811
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.980
LXL04_019823
PRJNA745038_MeJA_laticifer_RNAseq
r=-0.980

仅分析参考基因;各数据集保留相关性绝对值最高的 200 个伙伴。阈值筛选作用于这 200 个候选,不代表全基因组所有达标伙伴。下载包含当前筛选的全部缓存候选,不受分页影响。

下载全部筛选候选

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数据集 参考 矩阵 ID 共表达伙伴 r|r|方向排名样品数方法
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_017793 -0.9957 0.9957 负相关 1 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_000282 0.9902 0.9902 正相关 2 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_030528 -0.9901 0.9901 负相关 3 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_006853 -0.9881 0.9881 负相关 4 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_007050 -0.9854 0.9854 负相关 5 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_028590 -0.9852 0.9852 负相关 6 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_000814 0.9849 0.9849 正相关 7 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_033516 -0.9846 0.9846 负相关 8 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_013368 -0.9843 0.9843 负相关 9 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_005174 -0.9833 0.9833 负相关 10 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_014676 -0.9826 0.9826 负相关 11 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_019660 -0.9817 0.9817 负相关 12 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_033963 -0.9816 0.9816 负相关 13 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_018722 -0.9813 0.9813 负相关 14 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_036545 -0.9810 0.9810 负相关 15 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_036959 -0.9804 0.9804 负相关 16 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_012811 -0.9801 0.9801 负相关 17 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_019823 -0.9800 0.9800 负相关 18 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_009257 0.9798 0.9798 正相关 19 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_003680 -0.9798 0.9798 负相关 20 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_037646 -0.9795 0.9795 负相关 21 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_026454 -0.9789 0.9789 负相关 22 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_017684 -0.9788 0.9788 负相关 23 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_037185 -0.9785 0.9785 负相关 24 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_036205 -0.9782 0.9782 负相关 25 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_029701 0.9780 0.9780 正相关 26 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_021786 -0.9776 0.9776 负相关 27 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_037009 -0.9776 0.9776 负相关 28 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_021575 -0.9771 0.9771 负相关 29 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_024994 -0.9765 0.9765 负相关 30 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_002771 -0.9756 0.9756 负相关 31 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_014041 -0.9754 0.9754 负相关 32 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_026762 -0.9754 0.9754 负相关 33 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_018782 -0.9753 0.9753 负相关 34 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_018831 -0.9752 0.9752 负相关 35 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_011524 -0.9752 0.9752 负相关 36 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_013187 -0.9746 0.9746 负相关 37 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_018844 -0.9745 0.9745 负相关 38 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_038842 -0.9742 0.9742 负相关 39 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_021633 -0.9739 0.9739 负相关 40 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_003245 -0.9737 0.9737 负相关 41 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_017722 -0.9736 0.9736 负相关 42 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_022018 -0.9735 0.9735 负相关 43 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_037103 -0.9734 0.9734 负相关 44 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_013435 -0.9732 0.9732 负相关 45 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_008961 -0.9732 0.9732 负相关 46 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_037180 -0.9730 0.9730 负相关 47 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_038717 -0.9729 0.9729 负相关 48 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_024738 0.9724 0.9724 正相关 49 9 Pearson r on log2(value+1); reference genes only
PRJNA745038_MeJA_laticifer_RNAseq OH-1004 LXL04_000258 LXL04_004234 -0.9716 0.9716 负相关 50 9 Pearson r on log2(value+1); reference genes only