RubberDandelionOmics 橡胶草多组学网站
更多
转录组数据查询 注释 橡胶合成 转录因子预测 靶基因 蛋白关联网络 重测序 工具 下载
ZH EN

本页使用教程

基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDTkA08G429520
当前查询版本TK1151
位置Chr08:109137865-109142448 (-)
描述Similar to TTG1: Protein TRANSPARENT TESTA GLABRA 1 (Arabidopsis thaliana OX%3D3702)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_034722 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释；下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。

当前查询返回来自 OH1004 注释条目的 22 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At5g24520 可能调节 MYC 转录因子。
GL3 encodes a bHLH protein that regulates trichome development in arabidopsis through interaction with GL1 and TTG1.2000 · DOI: 10.1093/genetics/156.3.1349
At1g12910 时钟蛋白对于已知参与光周期传感的振荡器和输出基因的正确表达阶段和周期长度至关重要。
Two new clock proteins, LWD1 and LWD2, regulate Arabidopsis photoperiodic flowering.2008 · DOI: 10.1104/pp.108.124917
LIGHT-REGULATED WD1 and PSEUDO-RESPONSE REGULATOR9 form a positive feedback regulatory loop in the Arabidopsis circadian clock.2011 · DOI: 10.1105/tpc.110.081661
At3g26640 时钟蛋白对于已知参与光周期传感的振荡器和输出基因的正确表达阶段和周期长度至关重要。
Two new clock proteins, LWD1 and LWD2, regulate Arabidopsis photoperiodic flowering.2008 · DOI: 10.1104/pp.108.124917
LIGHT-REGULATED WD1 and PSEUDO-RESPONSE REGULATOR9 form a positive feedback regulatory loop in the Arabidopsis circadian clock.2011 · DOI: 10.1105/tpc.110.081661

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0009718anthocyanin-containing compound biosynthetic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=64.072; 覆盖度=99.701; E 值=2.97e-153; UniProt GO evidence=NAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009723response to ethylene生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009733response to auxin生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010026trichome differentiation生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016567protein ubiquitination生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122; UniProt GO evidence=IEA:UniProtKB-UniPathwayUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032880regulation of protein localization生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043153entrainment of circadian clock by photoperiod生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=64.072; 覆盖度=99.701; E 值=2.97e-153; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045165cell fate commitment生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048511rhythmic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=64.072; 覆盖度=99.701; E 值=2.97e-153; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048573photoperiodism, flowering生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=64.072; 覆盖度=99.701; E 值=2.97e-153; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090628plant epidermal cell fate specification生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosol细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016363nuclear matrix细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016604nuclear body细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032991protein-containing complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080008Cul4-RING E3 ubiquitin ligase complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=64.072; 覆盖度=99.701; E 值=2.97e-153; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030674protein-macromolecule adaptor activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122; UniProt GO evidence=ISS:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G12910KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=2; 一致性=64.072; 覆盖度=99.701; E 值=2.97e-153UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G26640KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=62.575; 覆盖度=99.701; E 值=1.69e-150UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G24520KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.608; 覆盖度=102.09; E 值=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:10238KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:71833KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.119; 覆盖度=100.0; E 值=1.15e-122UniProtKB/Swiss-Prot DAT 2026 current_release