基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA08G245920 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr08:64290971-64291899 (-) |
| 描述 | Similar to SGT1B: Protein SGT1 homolog B (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_011926 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 21 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g09970 |
在病原体相关分子模式 诱导的模式触发免疫 信号传导中发挥作用。 | |
At4g11260 |
参与植物先天免疫。 |
Arabidopsis SGT1b is required for defense signaling conferred by several downy mildew resistance genes.2002 · DOI: 10.1105/tpc.001123 Antagonistic control of disease resistance protein stability in the plant immune system.2005 · DOI: 10.1126/science.1109977 Role of SGT1 in resistance protein accumulation in plant immunity.2006 · DOI: 10.1038/sj.emboj.7601084 Interaction between SGT1 and cytosolic/nuclear HSC70 chaperones regulates Arabidopsis immune responses.2007 · DOI: 10.1105/tpc.107.051896
|
At4g23570 |
在 R 基因介导的抗性中发挥作用,但参与 RPP5 介导的抗性的程度低于 SGT1B。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os01g0624500 |
可能参与水稻对白叶枯病的基础抗性。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.085; 覆盖度=95.026; E 值=3.18e-150; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009408 | response to heat | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009867 | jasmonic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010187 | negative regulation of seed germination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030163 | protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=62.534; 覆盖度=97.12; E 值=4.08e-147; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051382 | kinetochore assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.511; 覆盖度=92.147; E 值=1.19e-59; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071365 | cellular response to auxin stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.085; 覆盖度=95.026; E 值=3.18e-150; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071456 | cellular response to hypoxia | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.085; 覆盖度=95.026; E 值=3.18e-150; UniProt GO evidence=HEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900150 | regulation of defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000776 | kinetochore | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.511; 覆盖度=92.147; E 值=1.19e-59; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019005 | SCF ubiquitin ligase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051087 | protein-folding chaperone binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G11260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.813; 覆盖度=95.288; E 值=4.04e-156 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G23570 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.085; 覆盖度=95.026; E 值=3.18e-150 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:515509 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.511; 覆盖度=92.147; E 值=1.19e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0624500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=62.534; 覆盖度=97.12; E 值=4.08e-147 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:103636097 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=62.534; 覆盖度=95.026; E 值=1.29e-148 | UniProtKB/Swiss-Prot DAT 2026 current_release |