基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA08G200740 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr08:52432640-52435515 (+) |
| 描述 | Similar to At1g30350: Probable pectate lyase 4 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_032725 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 10 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0009664 | plant-type cell wall organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.347; 覆盖度=101.534; E 值=4.41e-44; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042547 | cell wall modification involved in multidimensional cell growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.347; 覆盖度=101.534; E 值=4.41e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045490 | pectin catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.083; 覆盖度=73.62; E 值=8.02e-48; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098542 | defense response to other organism | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.347; 覆盖度=101.534; E 值=4.41e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.083; 覆盖度=73.62; E 值=8.02e-48; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.347; 覆盖度=101.534; E 值=4.41e-44; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.347; 覆盖度=101.534; E 值=4.41e-44; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098552 | side of membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.347; 覆盖度=101.534; E 值=4.41e-44; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030570 | pectate lyase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.083; 覆盖度=73.62; E 值=8.02e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.083; 覆盖度=73.62; E 值=8.02e-48; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G11920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=40.551; 覆盖度=77.914; E 值=2.14e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G30350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.083; 覆盖度=73.62; E 值=8.02e-48 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G54920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.347; 覆盖度=101.534; E 值=4.41e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G55720 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.161; 覆盖度=76.38; E 值=1.27e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:101253756 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.502; 覆盖度=77.607; E 值=3.27e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release |