基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA08G184890 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr08:48303665-48305419 (-) |
| 描述 | Similar to Y14: RNA-binding protein Y14 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_032528 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 19 条 GO 注释和 6 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g51510 |
可剪接依赖的多蛋白外显子连接复合体(EJC)核心组分,沉积于mRNA上的剪接接点。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os05g0140500 |
可剪接依赖的多蛋白外显子连接复合体(EJC)核心组分,沉积于mRNA上的剪接接点。 | |
Os03g0809900 |
可剪接依赖的多蛋白外显子连接复合体(EJC)核心组分,沉积于mRNA上的剪接接点。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=54.839; 覆盖度=61.692; E 值=6.68e-45; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=54.839; 覆盖度=61.692; E 值=6.68e-45; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006417 | regulation of translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.667; 覆盖度=59.701; E 值=3.73e-44; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051028 | mRNA transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035145 | exon-exon junction complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071006 | U2-type catalytic step 1 spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=54.839; 覆盖度=61.692; E 值=6.68e-45; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G51510 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.062; 覆盖度=95.522; E 值=4.21e-77 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0809900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=52.41; 覆盖度=82.587; E 值=2.03e-52 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0140500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=72.059; 覆盖度=67.662; E 值=1.85e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:503767 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.667; 覆盖度=59.701; E 值=3.73e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sasa:100196667 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=54.839; 覆盖度=61.692; E 值=6.68e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sasa:106581844 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=54.839; 覆盖度=61.692; E 值=6.68e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release |