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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA08G137140
Query referenceTK1151
LocationChr08:35653042-35655371 (-)
DescriptionSimilar to SYP131: Putative syntaxin-131 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_018940 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 34 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g03800 Vesicle trafficking protein that functions in the secretory pathway. No verified direct reference in this release
At5g08080 Vesicle trafficking protein that functions in the secretory pathway (Probable).
Syntaxin of plant proteins SYP123 and SYP132 mediate root hair tip growth in Arabidopsis thaliana.2014 · DOI: 10.1093/pcp/pcu048
Concerted Action of Evolutionarily Ancient and Novel SNARE Complexes in Flowering-Plant Cytokinesis.2018 · DOI: 10.1016/j.devcel.2017.12.027
Unusual Roles of Secretory SNARE SYP132 in Plasma Membrane H+-ATPase Traffic and Vegetative Plant Growth.2019 · DOI: 10.1104/pp.19.00266
At3g11820 Vesicle trafficking protein that functions in the secretory pathway (By similarity).
Arabidopsis SNAREs SYP61 and SYP121 coordinate the trafficking of plasma membrane aquaporin PIP2;7 to modulate the cell membrane water permeability.2014 · DOI: 10.1105/tpc.114.127159
At4g03330 Vesicle trafficking protein that functions in the secretory pathway (Probable).
Syntaxin of plant proteins SYP123 and SYP132 mediate root hair tip growth in Arabidopsis thaliana.2014 · DOI: 10.1093/pcp/pcu048

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0164300 Vesicle trafficking protein that functions in the secretory pathway (By similarity).
The Rice Qa-SNAREs in SYP13 Subfamily Are Involved in Regulating Arbuscular Mycorrhizal Symbiosis and Seed Fertility.2022 · DOI: 10.3389/fpls.2022.898286

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006612protein targeting to membraneBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006886intracellular protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006887exocytosisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006897endocytosisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.889; coverage=117.188; evalue=2.22e-80; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006906vesicle fusionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009620response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009737response to abscisic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009860pollen tube growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.009; coverage=115.104; evalue=1.65e-44; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010119regulation of stomatal movementBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010148transpirationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016192vesicle-mediated transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031348negative regulation of defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032940secretion by cellBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048278vesicle dockingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050832defense response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051301cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.889; coverage=117.188; evalue=2.22e-80; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0061025membrane fusionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=TAS:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0072659protein localization to plasma membraneBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0072660maintenance of protein location in plasma membraneBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.889; coverage=117.188; evalue=2.22e-80; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005802trans-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.889; coverage=117.188; evalue=2.22e-80; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009504cell plateCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.889; coverage=117.188; evalue=2.22e-80; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.889; coverage=117.188; evalue=2.22e-80; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0012505endomembrane systemCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016324apical plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030133transport vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.009; coverage=115.104; evalue=1.65e-44; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031201SNARE complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090404pollen tube tipCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000149SNARE bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005484SNAP receptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.319; coverage=119.271; evalue=5.52e-83; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043495protein-membrane adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G61290KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.009; coverage=115.104; evalue=1.65e-44UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G11820KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.0; coverage=117.188; evalue=2.83e-41UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G08080KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.889; coverage=117.188; evalue=2.22e-80UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0164300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.867; coverage=117.708; evalue=5.58e-69UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4342474KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.867; coverage=117.708; evalue=5.58e-69UniProtKB/Swiss-Prot DAT 2026 current_release