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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA08G022110
Query referenceTK1151
LocationChr08:5575127-5576657 (+)
DescriptionSimilar to WRI1: Ethylene-responsive transcription factor WRI1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_018179 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 32 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g54320 May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
Contrapuntal networks of gene expression during Arabidopsis seed filling.2002 · DOI: 10.1105/tpc.000877
WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis.2004 · DOI: 10.1111/j.1365-313x.2004.02235.x
ACTIVATOR of Spomin::LUC1/WRINKLED1 of Arabidopsis thaliana transactivates sugar-inducible promoters.2005 · DOI: 10.1093/pcp/pci072
A spatiotemporal analysis of enzymatic activities associated with carbon metabolism in wild-type and mutant embryos of Arabidopsis using in situ histochemistry.2006 · DOI: 10.1111/j.1365-313x.2006.02682.x
WRI1 is required for seed germination and seedling establishment.2006 · DOI: 10.1104/pp.106.079574
wrinkled1: A novel, low-seed-oil mutant of Arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism.1998 · DOI: 10.1104/pp.118.1.91
At2g41710 Probably acts as a transcriptional activator. No verified direct reference in this release
At1g79700 Probably acts as a transcriptional activator. No verified direct reference in this release
At1g16060 Probably acts as a transcriptional activator. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os05g0389000 Transcription activator involved in the control of organ size.
A novel AP2-type transcription factor, SMALL ORGAN SIZE1, controls organ size downstream of an auxin signaling pathway.2014 · DOI: 10.1093/pcp/pcu023
SMALL ORGAN SIZE 1 and SMALL ORGAN SIZE 2/DWARF AND LOW-TILLERING Form a Complex to Integrate Auxin and Brassinosteroid Signaling in Rice.2017 · DOI: 10.1016/j.molp.2016.12.013
The RLA1/SMOS1 Transcription Factor Functions with OsBZR1 to Regulate Brassinosteroid Signaling and Rice Architecture.2017 · DOI: 10.1105/tpc.16.00611

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006109regulation of carbohydrate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006110regulation of glycolytic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=TAS:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006629lipid metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007276gamete generationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.0; coverage=52.083; evalue=1.19e-10; UniProt GO evidence=IMP:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008610lipid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009744response to sucroseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009873ethylene-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010080regulation of floral meristem growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010311lateral root formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010492maintenance of shoot apical meristem identityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010601positive regulation of auxin biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.0; coverage=52.083; evalue=1.19e-10; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019432triglyceride biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019760glucosinolate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.0; coverage=52.083; evalue=1.19e-10; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030154cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.0; coverage=52.083; evalue=1.19e-10; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035265organ growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042127regulation of cell population proliferationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.0; coverage=52.083; evalue=1.19e-10; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048364root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048830adventitious root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.574; coverage=48.958; evalue=4.01e-12; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051301cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.0; coverage=52.083; evalue=1.19e-10; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060771phyllotactic patterningBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060772leaf phyllotactic patterningBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080037negative regulation of cytokinin-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.574; coverage=48.958; evalue=4.01e-12; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901959positive regulation of cutin biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1905392plant organ morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IMP:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019900kinase bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18; UniProt GO evidence=IPI:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G54320KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=52.083; evalue=3.19e-18UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G37750KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.0; coverage=52.083; evalue=1.19e-10UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G10510KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.447; coverage=48.958; evalue=2.39e-11UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G65510KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.0; coverage=52.083; evalue=1.86e-10UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0124700KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.574; coverage=48.958; evalue=4.01e-12UniProtKB/Swiss-Prot DAT 2026 current_release