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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA07G420990
Query referenceTK1151
LocationChr07:106381464-106384002 (+)
DescriptionSimilar to BHLH47: Transcription factor bHLH47 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_030645 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g47640 Transcription factor bHLH47. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0628500 Transcription factor that plays a positive role in salt stress tolerance.
OsJAZ9 acts as a transcriptional regulator in jasmonate signaling and modulates salt stress tolerance in rice.2015 · DOI: 10.1016/j.plantsci.2014.12.010
Os03g0379300 Transcription factor that acts as a negative regulator of the iron deficiency response.
Identification of a novel iron regulated basic helix-loop-helix protein involved in Fe homeostasis in Oryza sativa.2010 · DOI: 10.1186/1471-2229-10-166

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.24; coverage=109.045; evalue=3.66e-43; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.24; coverage=109.045; evalue=3.66e-43; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006879intracellular iron ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.023; coverage=43.216; evalue=1.06e-12; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010039response to iron ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.023; coverage=43.216; evalue=1.06e-12; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010106cellular response to iron ion starvationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.24; coverage=109.045; evalue=3.66e-43; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060586multicellular organismal-level iron ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.24; coverage=109.045; evalue=3.66e-43; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.24; coverage=109.045; evalue=3.66e-43; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.023; coverage=43.216; evalue=1.06e-12; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.023; coverage=43.216; evalue=1.06e-12; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.24; coverage=109.045; evalue=3.66e-43; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.24; coverage=109.045; evalue=3.66e-43; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046983protein dimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.24; coverage=109.045; evalue=3.66e-43; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990837sequence-specific double-stranded DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.87; coverage=46.231; evalue=2.3e-10; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G19860KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.87; coverage=46.231; evalue=2.3e-10UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G47640KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.24; coverage=109.045; evalue=3.66e-43UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G36060KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.023; coverage=43.216; evalue=1.06e-12UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0379300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.143; coverage=105.528; evalue=9.86e-37UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0628500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.389; coverage=106.03; evalue=2.82e-33UniProtKB/Swiss-Prot DAT 2026 current_release