Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA07G375370 |
|---|---|
| Query reference | TK1151 |
| Location | Chr07:94194898-94201838 (+) |
| Description | Similar to CDC73: Protein CDC73 homolog (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_030105 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 25 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g22590 |
Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 'Lys-4' (H3K4me3). |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os07g0622900 |
Functions in tapetum development during early meiosis. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.559; coverage=46.384; evalue=1.73e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001558 | regulation of cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006368 | transcription elongation by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.962; coverage=104.239; evalue=4.31e-179; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008285 | negative regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.559; coverage=46.384; evalue=1.73e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.962; coverage=104.239; evalue=4.31e-179; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009911 | positive regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.962; coverage=104.239; evalue=4.31e-179; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.962; coverage=104.239; evalue=4.31e-179; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016055 | Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019827 | stem cell population maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.559; coverage=46.384; evalue=1.73e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030177 | positive regulation of Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.559; coverage=46.384; evalue=1.73e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031124 | mRNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.559; coverage=46.384; evalue=1.73e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031442 | positive regulation of mRNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.559; coverage=46.384; evalue=1.73e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031648 | protein destabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.962; coverage=104.239; evalue=4.31e-179; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048147 | negative regulation of fibroblast proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050680 | negative regulation of epithelial cell proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071222 | cellular response to lipopolysaccharide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902808 | positive regulation of cell cycle G1/S phase transition | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.559; coverage=46.384; evalue=1.73e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000134 | negative regulation of G1/S transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.559; coverage=46.384; evalue=1.73e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.962; coverage=104.239; evalue=4.31e-179; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016593 | Cdc73/Paf1 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.962; coverage=104.239; evalue=4.31e-179; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000993 | RNA polymerase II complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.962; coverage=104.239; evalue=4.31e-179; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G22590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.962; coverage=104.239; evalue=4.31e-179 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:424356 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.559; coverage=46.384; evalue=1.73e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:304832 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.559; coverage=46.384; evalue=1.98e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release |