基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA07G079240 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr07:20724504-20727626 (-) |
| 描述 | Similar to CPSF30: 30-kDa cleavage and polyadenylation specificity factor 30 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_027623 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 38 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os06g0677700 |
含锌指CCCH结构域的蛋白 45。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000398 | mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006396 | RNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007286 | spermatid development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009626 | plant-type hypersensitive response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031124 | mRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031440 | regulation of mRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034052 | positive regulation of plant-type hypersensitive response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034612 | response to tumor necrosis factor | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=48.201; 覆盖度=16.667; E 值=5.7e-26; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043068 | positive regulation of programmed cell death | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044829 | host-mediated activation of viral genome replication | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=48.201; 覆盖度=16.667; E 值=5.7e-26; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048024 | regulation of mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051729 | germline cell cycle switching, mitotic to meiotic cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070555 | response to interleukin-1 | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=48.201; 覆盖度=16.667; E 值=5.7e-26; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000031 | regulation of salicylic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=48.201; 覆盖度=16.667; E 值=5.7e-26; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035770 | ribonucleoprotein granule | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004386 | helicase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=48.201; 覆盖度=16.667; E 值=5.7e-26; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004519 | endonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004521 | RNA endonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005516 | calmodulin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008186 | ATP-dependent activity, acting on RNA | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=48.201; 覆盖度=16.667; E 值=5.7e-26; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034458 | 3'-5' RNA helicase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070063 | RNA polymerase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990247 | N6-methyladenosine-containing RNA reader activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G30460 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.188; 覆盖度=82.734; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os06g0677700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=54.61; 覆盖度=84.532; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:64848 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.201; 覆盖度=16.667; E 值=9.02e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:240255 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=48.201; 覆盖度=16.667; E 值=5.7e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100173406 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.201; 覆盖度=16.667; E 值=5.62e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release |