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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA07G051030
Query referenceTK1151
LocationChr07:13548348-13554125 (-)
DescriptionSimilar to SCAR3: Protein SCAR3 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_027339 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 15 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g29170 Involved in regulation of actin and microtubule organization. No verified direct reference in this release
At2g34150 Involved in regulation of actin and microtubule organization. No verified direct reference in this release
At4g18600 Scar-like domain-containing protein WAVE 5. No verified direct reference in this release
At2g38440 Involved in regulation of actin and microtubule organization.
DISTORTED3/SCAR2 is a putative arabidopsis WAVE complex subunit that activates the Arp2/3 complex and is required for epidermal morphogenesis.2005 · DOI: 10.1105/tpc.104.027987
IRREGULAR TRICHOME BRANCH1 in Arabidopsis encodes a plant homolog of the actin-related protein2/3 complex activator Scar/WAVE that regulates actin and microtubule organization.2005 · DOI: 10.1105/tpc.104.028670

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0208600 Involved in regulation of actin and microtubule organization. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0030036actin cytoskeleton organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051127positive regulation of actin nucleationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000601positive regulation of Arp2/3 complex-mediated actin nucleationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.808; coverage=22.587; evalue=7.22e-70; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005856cytoskeletonCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.808; coverage=22.587; evalue=7.22e-70; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.251; coverage=58.643; evalue=1.38e-83; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.251; coverage=58.643; evalue=1.38e-83; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031209SCAR complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071944cell peripheryCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.251; coverage=58.643; evalue=1.38e-83; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003779actin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003785actin monomer bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.251; coverage=58.643; evalue=1.38e-83; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034237protein kinase A regulatory subunit bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071933Arp2/3 complex bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G29170KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.011; coverage=114.74; evalue=1.96e-135UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G34150KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.251; coverage=58.643; evalue=1.38e-83UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G18600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.808; coverage=22.587; evalue=7.22e-70UniProtKB/Swiss-Prot DAT 2026 current_release