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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA07G029420
Query referenceTK1151
LocationChr07:7870703-7872717 (-)
DescriptionSimilar to At1g14600: Putative Myb family transcription factor At1g14600 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_027063 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g14600 Putative transcription factor. No verified direct reference in this release
At5g42630 Probable transcription factor that regulates carpel integuments formation.
ABERRANT TESTA SHAPE encodes a KANADI family member, linking polarity determination to separation and growth of Arabidopsis ovule integuments.2006 · DOI: 10.1111/j.1365-313x.2006.02717.x
A new dominant Arabidopsis transparent testa mutant, sk21-D, and modulation of seed flavonoid biosynthesis by KAN4.2010 · DOI: 10.1111/j.1467-7652.2010.00525.x
At4g17695 Probable transcription factor that regulates lateral organ polarity. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os06g0670300 Probable transcription factor involved in the regulation of plant height by elongating internode cell length.
OsMPH1 regulates plant height and improves grain yield in rice.2017 · DOI: 10.1371/journal.pone.0180825
OsMYB45 plays an important role in rice resistance to cadmium stress.2017 · DOI: 10.1016/j.plantsci.2017.08.002
Os04g0566600 Transcriptional repressor that plays a role in the regulation of organ identity and spikelet meristem determinacy.
MORE FLORET1 Encodes a MYB Transcription Factor That Regulates Spikelet Development in Rice.2020 · DOI: 10.1104/pp.20.00658

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.636; coverage=28.519; evalue=3.49e-26; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.254; coverage=23.333; evalue=8.96e-24; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010158abaxial cell fate specificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.809; coverage=34.815; evalue=9.64e-19; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010582floral meristem determinacyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.254; coverage=23.333; evalue=8.96e-24; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010629negative regulation of gene expressionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.254; coverage=23.333; evalue=8.96e-24; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030154cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.254; coverage=23.333; evalue=8.96e-24; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048481plant ovule developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.809; coverage=34.815; evalue=9.64e-19; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080060integument developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.809; coverage=34.815; evalue=9.64e-19; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.636; coverage=28.519; evalue=3.49e-26; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.988; coverage=30.741; evalue=4.97e-18; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009505plant-type cell wallCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.809; coverage=34.815; evalue=9.64e-19; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.809; coverage=34.815; evalue=9.64e-19; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.636; coverage=28.519; evalue=3.49e-26; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.636; coverage=28.519; evalue=3.49e-26; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G14600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.904; coverage=27.037; evalue=9.95e-22UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G17695KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.988; coverage=30.741; evalue=4.97e-18UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G42630KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.809; coverage=34.815; evalue=9.64e-19UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0566600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.254; coverage=23.333; evalue=8.96e-24UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os06g0670300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.636; coverage=28.519; evalue=3.49e-26UniProtKB/Swiss-Prot DAT 2026 current_release