Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G316270 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:79279548-79282949 (-) |
| Description | Similar to RCC2: Protein RCC2 (Homo sapiens OX%3D9606) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_008802 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 42 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g60870 |
Regulates DNA damage response (DDR) synergistically with ATM. |
The RCC1 family protein RUG3 is required for splicing of nad2 and complex I biogenesis in mitochondria of Arabidopsis thaliana.2011 · DOI: 10.1111/j.1365-313x.2011.04658.x
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0007229 | integrin-mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009411 | response to UV | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009649 | entrainment of circadian clock | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010762 | regulation of fibroblast migration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010971 | positive regulation of G2/M transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030334 | regulation of cell migration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034260 | negative regulation of GTPase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045184 | establishment of protein localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048041 | focal adhesion assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051895 | negative regulation of focal adhesion assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051987 | positive regulation of attachment of spindle microtubules to kinetochore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072356 | chromosome passenger complex localization to kinetochore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090630 | activation of GTPase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.468; coverage=88.679; evalue=3.52e-72; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900025 | negative regulation of substrate adhesion-dependent cell spreading | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900027 | regulation of ruffle assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000775 | chromosome, centromeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.172; coverage=90.0; evalue=1.8e-73; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.468; coverage=88.679; evalue=3.52e-72; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.172; coverage=90.0; evalue=1.8e-73; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005874 | microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.172; coverage=90.0; evalue=1.8e-73; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030496 | midbody | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034506 | chromosome, centromeric core domain | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990023 | mitotic spindle midzone | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005085 | guanyl-nucleotide exchange factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009881 | photoreceptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019904 | protein domain specific binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031267 | small GTPase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G63860 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.887; coverage=61.698; evalue=1.96e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:406455 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.141; coverage=85.66; evalue=1.79e-68 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:55920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.599; coverage=89.434; evalue=6.39e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:108911 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.468; coverage=88.679; evalue=3.52e-72 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:734455 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.172; coverage=90.0; evalue=1.8e-73 | UniProtKB/Swiss-Prot DAT 2026 current_release |