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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA06G176050
Query referenceTK1151
LocationChr06:46205459-46205940 (-)
DescriptionSimilar to NIP2-1: Aquaporin NIP2-1 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_024087 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 7 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

Reference gene IDPossible functionPapers / DOI
Os02g0745100 Silicon influx transporter responsible for silicon transport from the external solution to the root cells.
A silicon transporter in rice.2006 · DOI: 10.1038/nature04590
An efflux transporter of silicon in rice.2007 · DOI: 10.1038/nature05964
Transporters of arsenite in rice and their role in arsenic accumulation in rice grain.2008 · DOI: 10.1073/pnas.0802361105
The rice aquaporin Lsi1 mediates uptake of methylated arsenic species.2009 · DOI: 10.1104/pp.109.140350
Os06g0228200 Silicon transporter involved in the distribution of silicon in shoots.
A transporter regulating silicon distribution in rice shoots.2008 · DOI: 10.1105/tpc.108.059311
Orchestration of three transporters and distinct vascular structures in node for intervascular transfer of silicon in rice.2015 · DOI: 10.1073/pnas.1508987112

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0015708silicic acid import across plasma membraneBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.462; coverage=96.748; evalue=2.85e-35; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015840urea transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.918; coverage=99.187; evalue=3.89e-35; UniProt GO evidence=IDA:CACAOUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.462; coverage=96.748; evalue=2.85e-35; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.462; coverage=96.748; evalue=2.85e-35; UniProt GO evidence=IDA:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048226Casparian stripCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.462; coverage=96.748; evalue=2.85e-35; UniProt GO evidence=IDA:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015115silicate transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.462; coverage=96.748; evalue=2.85e-35; UniProt GO evidence=IDA:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015267channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.462; coverage=96.748; evalue=2.85e-35; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os02g0745100KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.462; coverage=96.748; evalue=2.85e-35UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os06g0228200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.206; coverage=102.439; evalue=1.45e-32UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGzma:541884KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.794; coverage=102.439; evalue=3.68e-32UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGzma:542497KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=68.235; coverage=69.106; evalue=1.22e-31UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGzma:542643KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.918; coverage=99.187; evalue=3.89e-35UniProtKB/Swiss-Prot DAT 2026 current_release