Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G053370 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:14401239-14402706 (-) |
| Description | Similar to THF1: Protein THYLAKOID FORMATION1%2C chloroplastic (Solanum tuberosum OX%3D4113) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025545 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 23 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g20890 |
Involved in a dynamic process of vesicle-mediated thylakoid membrane biogenesis. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os07g0558500 |
Involved in a dynamic process of vesicle-mediated thylakoid membrane biogenesis. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0007186 | G protein-coupled receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010027 | thylakoid membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.242; coverage=99.655; evalue=2e-145; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010182 | sugar mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010207 | photosystem II assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.242; coverage=99.655; evalue=2e-145; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015996 | chlorophyll catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045037 | protein import into chloroplast stroma | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.242; coverage=99.655; evalue=2e-145; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045038 | protein import into chloroplast thylakoid membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.242; coverage=99.655; evalue=2e-145; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050829 | defense response to Gram-negative bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072597 | maintenance of protein location in chloroplast | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902458 | positive regulation of stomatal opening | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903426 | regulation of reactive oxygen species biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000070 | regulation of response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009527 | plastid outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009528 | plastid inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009532 | plastid stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009534 | chloroplast thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.242; coverage=99.655; evalue=2e-145; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009707 | chloroplast outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.242; coverage=99.655; evalue=2e-145; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010319 | stromule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G20890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.99; coverage=101.034; evalue=3.55e-142 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cyn:Cyan7425_5166 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.555; coverage=78.966; evalue=1.07e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0558500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=75.41; coverage=84.138; evalue=2.15e-128 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sot:102577610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.242; coverage=99.655; evalue=2e-145 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ter:Tery_1168 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.884; coverage=74.138; evalue=4.81e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release |