Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G023850 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:6485440-6488664 (+) |
| Description | Similar to AP2M: AP-2 complex subunit mu (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026160 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 28 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g46630 |
Subunit of the adaptor protein complex 2 (AP-2). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002092 | positive regulation of receptor internalization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006896 | Golgi to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006897 | endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006900 | vesicle budding from membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=TAS:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031623 | receptor internalization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0065003 | protein-containing complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072583 | clathrin-dependent endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.283; coverage=100.0; evalue=2.19e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097494 | regulation of vesicle size | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903077 | negative regulation of protein localization to plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=HDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005905 | clathrin-coated pit | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009898 | cytoplasmic side of plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030121 | AP-1 adaptor complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030122 | AP-2 adaptor complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.283; coverage=100.0; evalue=2.19e-170; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030132 | clathrin coat of coated pit | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.283; coverage=100.0; evalue=2.19e-170; UniProt GO evidence=IC:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030141 | secretory granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=TAS:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031201 | SNARE complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.283; coverage=100.0; evalue=2.19e-170; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005048 | signal sequence binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035615 | clathrin adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044325 | transmembrane transporter binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050750 | low-density lipoprotein particle receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097718 | disordered domain specific binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G46630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.205; coverage=100.0; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0277139 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.283; coverage=100.0; evalue=2.19e-170 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:11773 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.402; coverage=100.0; evalue=2.91e-154 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:116563 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.402; coverage=100.0; evalue=2.91e-154 | UniProtKB/Swiss-Prot DAT 2026 current_release |