基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA06G009030 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr06:2313217-2313843 (-) |
| 描述 | Similar to RING1: E3 ubiquitin-protein ligase RING1 (Gossypium hirsutum OX%3D3635) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_026490 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g19950 |
E3 泛素蛋白连接酶以硫酯的形式接受来自 E2 泛素结合酶的泛素,然后将泛素直接转移至目标底物。 | 暂无已核实直接文献 |
At3g56580 |
E3 泛素蛋白连接酶,可促进渗透应激和脱落酸 反应。 | |
At2g40830 |
可能的 E3 泛素蛋白连接酶,在体外可能具有 E3 泛素连接酶活性。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os05g0488800 |
在体外具有E3泛素-蛋白连接酶活性。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000209 | protein polyubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.889; 覆盖度=77.885; E 值=1.18e-30; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.5; 覆盖度=96.154; E 值=6.82e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.485; 覆盖度=49.519; E 值=1.54e-31; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009938 | negative regulation of gibberellic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.485; 覆盖度=49.519; E 值=1.54e-31; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.439; 覆盖度=78.846; E 值=7.61e-56; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051865 | protein autoubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.889; 覆盖度=77.885; E 值=1.18e-30; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061635 | regulation of protein complex stability | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.889; 覆盖度=77.885; E 值=1.18e-30; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071218 | cellular response to misfolded protein | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.889; 覆盖度=77.885; E 值=1.18e-30; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071456 | cellular response to hypoxia | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.889; 覆盖度=77.885; E 值=1.18e-30; UniProt GO evidence=HEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071629 | cytoplasm protein quality control by the ubiquitin-proteasome system | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.889; 覆盖度=77.885; E 值=1.18e-30; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090378 | seed trichome elongation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.439; 覆盖度=78.846; E 值=7.61e-56; UniProt GO evidence=IEP:AgBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.553; 覆盖度=77.404; E 值=2.76e-53; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.439; 覆盖度=78.846; E 值=7.61e-56; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.889; 覆盖度=77.885; E 值=1.18e-30; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.485; 覆盖度=49.519; E 值=1.54e-31; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.485; 覆盖度=49.519; E 值=1.54e-31; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.439; 覆盖度=78.846; E 值=7.61e-56; UniProt GO evidence=IDA:AgBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.439; 覆盖度=78.846; E 值=7.61e-56; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051787 | misfolded protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.889; 覆盖度=77.885; E 值=1.18e-30; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.439; 覆盖度=78.846; E 值=7.61e-56; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G26800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.889; 覆盖度=77.885; E 值=1.18e-30 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G40830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.485; 覆盖度=49.519; E 值=1.54e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G19950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.553; 覆盖度=77.404; E 值=2.76e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0488800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.5; 覆盖度=96.154; E 值=6.82e-48 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4339152 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.5; 覆盖度=96.154; E 值=6.82e-48 | UniProtKB/Swiss-Prot DAT 2026 current_release |