基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA05G248950 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr05:61919868-61922647 (+) |
| 描述 | Similar to 4CLL1: 4-coumarate--CoA ligase-like 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_020604 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 25 条 GO 注释和 2 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g62940 |
羧酸-CoA连接酶,可能以4-香豆酸为底物。 | 暂无已核实直接文献 |
At3g21240 |
产生多种羟基和甲氧基取代的肉桂酸酰基辅酶A,这些化合物用于合成多种来源于苯丙烷的化合物,包括花青素、类黄酮、异黄酮、香豆素、木质素、木栓质和壁结合的酚类化合物。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os04g0310700 |
羧酸-CoA连接酶,可能以4-香豆酸为底物。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0007623 | circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.361; 覆盖度=97.814; E 值=8.21e-127; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009411 | response to UV | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.674; 覆盖度=98.907; E 值=2.91e-130; UniProt GO evidence=IEP:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.674; 覆盖度=98.907; E 值=2.91e-130; UniProt GO evidence=IEP:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009620 | response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.674; 覆盖度=98.907; E 值=2.91e-130; UniProt GO evidence=IEP:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009698 | phenylpropanoid metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=60.448; 覆盖度=97.632; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009800 | cinnamic acid biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.361; 覆盖度=97.814; E 值=8.21e-127; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009803 | cinnamic acid metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.361; 覆盖度=97.814; E 值=8.21e-127; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033494 | ferulate metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.361; 覆盖度=97.814; E 值=8.21e-127; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046949 | fatty-acyl-CoA biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052315 | phytoalexin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.361; 覆盖度=97.814; E 值=8.21e-127; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080110 | sporopollenin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.361; 覆盖度=97.814; E 值=8.21e-127; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004467 | long-chain fatty acid-CoA ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016207 | 4-coumarate-CoA ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=60.448; 覆盖度=97.632; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016405 | CoA-ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.361; 覆盖度=97.814; E 值=8.21e-127; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018858 | benzoate-CoA ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.361; 覆盖度=97.814; E 值=8.21e-127; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031956 | medium-chain fatty acid-CoA ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050563 | trans-feruloyl-CoA synthase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.361; 覆盖度=97.814; E 值=8.21e-127; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106286 | (E)-caffeate-CoA ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.674; 覆盖度=98.907; E 值=2.91e-130; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106290 | trans-cinnamate-CoA ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=60.448; 覆盖度=97.632; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G62940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.978; 覆盖度=97.268; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G21240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.674; 覆盖度=98.907; E 值=2.91e-130 | UniProtKB/Swiss-Prot DAT 2026 current_release |