Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA05G002160 |
|---|---|
| Query reference | TK1151 |
| Location | Chr05:624570-636492 (+) |
| Description | Similar to PEX6: Peroxisome biogenesis protein 6 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_018869 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 19 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g03000 |
Component of the PEX1-PEX6 AAA ATPase complex, a protein dislocase complex that mediates the ATP-dependent extraction of the PEX5 receptor from peroxisomal membranes, an essential step for PEX5 recycling. |
An Arabidopsis indole-3-butyric acid-response mutant defective in PEROXIN6, an apparent ATPase implicated in peroxisomal function.2004 · DOI: 10.1073/pnas.0304368101 Functional classification of Arabidopsis peroxisome biogenesis factors proposed from analyses of knockdown mutants.2007 · DOI: 10.1093/pcp/pcm053
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006625 | protein targeting to peroxisome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.972; coverage=90.326; evalue=1.8e-135; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006635 | fatty acid beta-oxidation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.82; coverage=100.526; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007031 | peroxisome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.829; coverage=68.244; evalue=3.59e-147; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016558 | protein import into peroxisome matrix | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.82; coverage=100.526; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016561 | protein import into peroxisome matrix, translocation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.972; coverage=90.326; evalue=1.8e-135; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016562 | protein import into peroxisome matrix, receptor recycling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.259; coverage=70.978; evalue=1.05e-135; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043335 | protein unfolding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.82; coverage=100.526; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050821 | protein stabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.972; coverage=90.326; evalue=1.8e-135; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.972; coverage=90.326; evalue=1.8e-135; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.829; coverage=68.244; evalue=3.59e-147; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005778 | peroxisomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.82; coverage=100.526; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.82; coverage=100.526; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.82; coverage=100.526; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904949 | ATPase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.259; coverage=70.978; evalue=1.05e-135; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.82; coverage=100.526; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.82; coverage=100.526; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.972; coverage=90.326; evalue=1.8e-135; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140036 | ubiquitin-modified protein reader activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.972; coverage=90.326; evalue=1.8e-135; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140318 | protein transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.259; coverage=70.978; evalue=1.05e-135; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G03000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.82; coverage=100.526; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0292788 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.829; coverage=68.244; evalue=3.59e-147 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:5190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.852; coverage=82.229; evalue=3.74e-134 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:117265 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.972; coverage=90.326; evalue=1.8e-135 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | yli:2909504 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.259; coverage=70.978; evalue=1.05e-135 | UniProtKB/Swiss-Prot DAT 2026 current_release |