Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA04G439630 |
|---|---|
| Query reference | TK1151 |
| Location | Chr04:110897131-110898871 (-) |
| Description | Similar to RPT2B: 26S proteasome regulatory subunit 4 homolog B (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_000183 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 39 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007292 | female gamete generation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009408 | response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009933 | meristem structural organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009965 | leaf morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010015 | root morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010078 | maintenance of root meristem identity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010229 | inflorescence development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010311 | lateral root formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010498 | proteasomal protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.97; coverage=36.872; evalue=2.61e-08; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031503 | protein-containing complex localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.818; coverage=24.581; evalue=3.7e-09; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035266 | meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043171 | peptide catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.818; coverage=24.581; evalue=3.7e-09; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043248 | proteasome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045732 | positive regulation of protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.818; coverage=24.581; evalue=3.7e-09; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048232 | male gamete generation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048367 | shoot system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048827 | phyllome development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048829 | root cap development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051788 | response to misfolded protein | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070651 | nonfunctional rRNA decay | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.818; coverage=24.581; evalue=3.7e-09; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070682 | proteasome regulatory particle assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.818; coverage=24.581; evalue=3.7e-09; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090351 | seedling development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000502 | proteasome complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000932 | P-body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.97; coverage=36.872; evalue=2.61e-08; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.714; coverage=39.106; evalue=3.01e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005838 | proteasome regulatory particle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.97; coverage=36.872; evalue=2.61e-08; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008540 | proteasome regulatory particle, base subcomplex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036402 | proteasome-activating activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G20140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.948; coverage=43.017; evalue=1.53e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G29040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.948; coverage=43.017; evalue=1.65e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG5289 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.97; coverage=36.872; evalue=2.61e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0691800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.714; coverage=39.106; evalue=3.01e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YDL007W | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.818; coverage=24.581; evalue=3.7e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release |