Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA04G167620`
Query reference	TK1151
Location	Chr04:43325077-43326938 (+)
Description	Similar to DREB2A: Dehydration-responsive element-binding protein 2A (Oryza sativa subsp. indica OX%3D39946)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_035105 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g05410`	Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'.	DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration- and cold-inducible gene expression.2002 · DOI: 10.1006/bbrc.2001.6299 Arabidopsis DPB3-1, a DREB2A interactor, specifically enhances heat stress-induced gene expression by forming a heat stress-specific transcriptional complex with NF-Y subunits.2014 · DOI: 10.1105/tpc.114.132928
`At3g11020`	Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'.	No verified direct reference in this release

Rice

Reference gene ID	Possible function	Papers / DOI
`Os05g0346200`	Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE).	Comprehensive analysis of rice DREB2-type genes that encode transcription factors involved in the expression of abiotic stress-responsive genes.2010 · DOI: 10.1007/s00438-009-0506-y
`UniProt: A2WL19`	Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'.	No verified direct reference in this release
`Os01g0165000`	Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE).	OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and cold-responsive gene expression.2003 · DOI: 10.1046/j.1365-313x.2003.01661.x

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.451; coverage=53.529; evalue=1.08e-49; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006950	response to stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.451; coverage=53.529; evalue=1.08e-49; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009408	response to heat	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.654; coverage=37.353; evalue=1.63e-43; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009414	response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.654; coverage=37.353; evalue=1.63e-43; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009737	response to abscisic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.0; coverage=102.941; evalue=2.21e-49; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009738	abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.0; coverage=102.941; evalue=2.21e-49; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010224	response to UV-B	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.654; coverage=37.353; evalue=1.63e-43; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010286	heat acclimation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.0; coverage=102.941; evalue=2.21e-49; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042542	response to hydrogen peroxide	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.654; coverage=37.353; evalue=1.63e-43; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045893	positive regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.451; coverage=53.529; evalue=1.08e-49; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071456	cellular response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.654; coverage=37.353; evalue=1.63e-43; UniProt GO evidence=HEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.451; coverage=53.529; evalue=1.08e-49; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.451; coverage=53.529; evalue=1.08e-49; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.451; coverage=53.529; evalue=1.08e-49; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G40340	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.0; coverage=102.941; evalue=2.21e-49	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G40350	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=63.2; coverage=36.765; evalue=3.48e-45	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G05410	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.654; coverage=37.353; evalue=1.63e-43	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os01g0165000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.451; coverage=53.529; evalue=1.27e-49	UniProtKB/Swiss-Prot DAT 2026 current_release