基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA04G086020 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr04:22510758-22512679 (+) |
| 描述 | Similar to PAB4: Polyadenylate-binding protein 4 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_036000 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006413 | translational initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006417 | regulation of translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006446 | regulation of translational initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048255 | mRNA stabilization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060211 | regulation of nuclear-transcribed mRNA poly(A) tail shortening | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900151 | regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=47.656; 覆盖度=92.086; E 值=6.39e-28; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005773 | vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003730 | mRNA 3'-UTR binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003743 | translation initiation factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008143 | poly(A) binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008266 | poly(U) RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G49760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=47.656; 覆盖度=92.086; E 值=6.39e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G23350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.606; 覆盖度=91.367; E 值=2.51e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G34110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.073; 覆盖度=117.986; E 值=1.84e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release |