基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA04G008750 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr04:2103917-2106200 (-) |
| 描述 | Similar to MIEL1: E3 ubiquitin-protein ligase MIEL1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_037042 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 7 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g18650 |
E3 泛素蛋白连接酶,充当细胞死亡和防御的调节剂。 | |
At5g22920 |
具有体外 E3 泛素蛋白连接酶活性。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0348900 |
具有体外 E3 泛素蛋白连接酶活性。 | |
Os01g0719100 |
在酵母细胞中具有反式激活活性。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010255 | glucose mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.27; 覆盖度=94.382; E 值=3.68e-65; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031398 | positive regulation of protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051865 | protein autoubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072344 | rescue of stalled cytosolic ribosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900425 | negative regulation of defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902456 | regulation of stomatal opening | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.515; 覆盖度=89.513; E 值=2.31e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000151 | ubiquitin ligase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.515; 覆盖度=89.513; E 值=2.31e-67; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002039 | p53 binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005102 | signaling receptor binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G18650 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=51.639; 覆盖度=91.386; E 值=2.7e-85 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G22920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.515; 覆盖度=89.513; E 值=2.31e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0719100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.27; 覆盖度=94.382; E 值=3.68e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0348900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.352; 覆盖度=87.266; E 值=6.68e-68 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:68098 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.627; 覆盖度=88.39; E 值=2.75e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4324695 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.27; 覆盖度=94.382; E 值=3.68e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4332833 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.352; 覆盖度=87.266; E 值=6.68e-68 | UniProtKB/Swiss-Prot DAT 2026 current_release |