Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G559510 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:141844422-141849357 (-) |
| Description | Similar to chtf18: Chromosome transmission fidelity protein 18 homolog (Xenopus laevis OX%3D8355) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_033298 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 21 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g22010 |
Plays a role as mediator of transcriptional gene silencing (TGS), DNA replication, DNA repair, hypersensitive response (HR) and telomere length regulation. |
Arabidopsis replication factor C subunit 1 plays an important role in embryogenesis.2007 · PMID: 17556804 DNA replication factor C1 mediates genomic stability and transcriptional gene silencing in Arabidopsis.2010 · DOI: 10.1105/tpc.110.076349
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os11g0572100 |
May be involved in DNA replication and thus regulate cell proliferation. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006260 | DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007062 | sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.841; coverage=79.851; evalue=1.51e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007140 | male meiotic nuclear division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.841; coverage=79.851; evalue=1.51e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045005 | DNA-templated DNA replication maintenance of fidelity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.819; coverage=79.104; evalue=4.16e-55; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048468 | cell development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.841; coverage=79.851; evalue=1.51e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051985 | negative regulation of chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.841; coverage=79.851; evalue=1.51e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900264 | positive regulation of DNA-directed DNA polymerase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.331; coverage=80.49; evalue=4.82e-82; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.819; coverage=79.104; evalue=4.16e-55; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.331; coverage=80.49; evalue=4.82e-82; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005663 | DNA replication factor C complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.841; coverage=79.851; evalue=1.51e-81; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.331; coverage=80.49; evalue=4.82e-82; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031390 | Ctf18 RFC-like complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.325; coverage=86.887; evalue=2.75e-90; UniProt GO evidence=ISS:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043596 | nuclear replication fork | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.819; coverage=79.104; evalue=4.16e-55; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003689 | DNA clamp loader activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | dme:Dmel_CG33122 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.325; coverage=86.887; evalue=2.75e-90 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:63922 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.331; coverage=80.49; evalue=4.82e-82 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:214901 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.841; coverage=79.851; evalue=1.51e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2541270 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.819; coverage=79.104; evalue=4.16e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:414577 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.876; coverage=92.644; evalue=1.24e-99 | UniProtKB/Swiss-Prot DAT 2026 current_release |