基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA03G548080 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr03:138263472-138265769 (+) |
| 描述 | Similar to RRP41L: Exosome complex component RRP41-like (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_013061 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 19 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g61620 |
RNA外切体复合物的非催化组分;该复合物具有3′→5′核糖核酸外切酶活性,参与多种细胞RNA的加工、成熟和降解。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000956 | nuclear-transcribed mRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=33.333; 覆盖度=89.062; E 值=9.07e-38; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009845 | seed germination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010467 | gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=33.333; 覆盖度=89.062; E 值=9.07e-38; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016075 | rRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034475 | U4 snRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071028 | nuclear mRNA surveillance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071051 | poly(A)-dependent snoRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090351 | seedling development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000176 | nuclear exosome (RNase complex) | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000177 | cytoplasmic exosome (RNase complex) | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000178 | exosome (RNase complex) | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=38.426; 覆盖度=84.375; E 值=1.61e-41; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000175 | 3'-5'-RNA exonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=33.333; 覆盖度=89.062; E 值=9.07e-38; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008408 | 3'-5' exonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G27490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.093; 覆盖度=100.781; E 值=7.83e-138 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:326786 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=38.426; 覆盖度=84.375; E 值=1.61e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pfu:PF1568 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=33.333; 覆盖度=89.062; E 值=9.07e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pho:PH1549 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.895; 覆盖度=89.062; E 值=2.55e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:549770 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.462; 覆盖度=87.109; E 值=1.64e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release |