Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G434460 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:108103329-108107539 (+) |
| Description | Similar to RID3: Protein ROOT INITIATION DEFECTIVE 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_009407 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000448 | cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.08; coverage=75.391; evalue=1.13e-25; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006261 | DNA-templated DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.952; coverage=103.356; evalue=2.1e-62; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.952; coverage=103.356; evalue=2.1e-62; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007368 | determination of left/right symmetry | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.116; coverage=96.197; evalue=1.96e-28; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902184 | negative regulation of shoot apical meristem development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.952; coverage=103.356; evalue=2.1e-62; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.08; coverage=75.391; evalue=1.13e-25; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.08; coverage=75.391; evalue=1.13e-25; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005656 | nuclear pre-replicative complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.952; coverage=103.356; evalue=2.1e-62; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.542; coverage=71.365; evalue=1.69e-36; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.952; coverage=103.356; evalue=2.1e-62; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.952; coverage=103.356; evalue=2.1e-62; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120293 | dynein axonemal particle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.542; coverage=71.365; evalue=1.69e-36; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120330 | rixosome complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.952; coverage=103.356; evalue=2.1e-62; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G49180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.952; coverage=103.356; evalue=2.1e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:533356 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.706; coverage=76.063; evalue=7.64e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:445819 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.116; coverage=96.197; evalue=1.96e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:57418 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.08; coverage=75.391; evalue=1.13e-25 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:733228 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.542; coverage=71.365; evalue=1.69e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release |