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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G430400
Query referenceTK1151
LocationChr03:107114901-107115338 (-)
DescriptionSimilar to DOF1.7: Dof zinc finger protein DOF1.7 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_022412 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 15 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g51700 Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. No verified direct reference in this release
At3g45610 Transcription factor that negatively affects seed germination and opposes TCP14 function in the regulation of a specific set of abscisic acid-related genes.
Arabidopsis thaliana DOF6 negatively affects germination in non-after-ripened seeds and interacts with TCP14.2012 · DOI: 10.1093/jxb/err388
Mobile PEAR transcription factors integrate positional cues to prime cambial growth.2019 · DOI: 10.1038/s41586-018-0839-y
At5g60200 Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity).
Mobile PEAR transcription factors integrate positional cues to prime cambial growth.2019 · DOI: 10.1038/s41586-018-0839-y
At3g50410 Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. No verified direct reference in this release
At3g21270 Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.566; coverage=22.083; evalue=1.27e-29; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.566; coverage=22.083; evalue=1.27e-29; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009733response to auxinBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=83.019; coverage=22.083; evalue=2.12e-26; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009751response to salicylic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=83.019; coverage=22.083; evalue=2.12e-26; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010087phloem or xylem histogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.324; coverage=57.917; evalue=3.54e-27; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042545cell wall modificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=83.019; coverage=22.083; evalue=2.12e-26; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045787positive regulation of cell cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=83.019; coverage=22.083; evalue=2.12e-26; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045893positive regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=83.019; coverage=22.083; evalue=2.12e-26; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048364root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.324; coverage=57.917; evalue=3.54e-27; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090057root radial pattern formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.407; coverage=51.25; evalue=1.71e-28; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.566; coverage=22.083; evalue=1.27e-29; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.566; coverage=22.083; evalue=1.27e-29; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=83.019; coverage=22.083; evalue=2.12e-26; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.566; coverage=22.083; evalue=1.27e-29; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.566; coverage=22.083; evalue=1.27e-29; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G51700KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.566; coverage=22.083; evalue=1.27e-29UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G45610KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.407; coverage=51.25; evalue=1.71e-28UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G50410KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=83.019; coverage=22.083; evalue=2.12e-26UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G60200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.324; coverage=57.917; evalue=3.54e-27UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G66940KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.245; coverage=22.083; evalue=2.62e-26UniProtKB/Swiss-Prot DAT 2026 current_release