RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDTkA03G371950
Query referenceTK1151
LocationChr03:91761100-91761528 (+)
DescriptionSimilar to ASK11: SKP1-like protein 11 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_008440 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g34210 Involved in ubiquitination and subsequent proteasomal degradation of target proteins.
Members of the Arabidopsis-SKP1-like gene family exhibit a variety of expression patterns and may play diverse roles in Arabidopsis.2003 · DOI: 10.1104/pp.103.024703
At4g34470 Involved in ubiquitination and subsequent proteasomal degradation of target proteins. No verified direct reference in this release
At5g42190 Involved in ubiquitination and subsequent proteasomal degradation of target proteins. No verified direct reference in this release
At1g75950 Involved in ubiquitination and subsequent proteasomal degradation of target proteins.
The Arabidopsis SKP1-LIKE1 gene is essential for male meiosis and may control homologue separation.1999 · DOI: 10.1073/pnas.96.20.11416
The ASK1 gene regulates development and interacts with the UFO gene to control floral organ identity in Arabidopsis.1999 · DOI: 10.1002/(sici)1520-6408(1999)25:3<209::aid-dvg4>3.0.co;2-o
The ASK1 gene regulates B function gene expression in cooperation with UFO and LEAFY in Arabidopsis.2001 · DOI: 10.1242/dev.128.14.2735
Members of the Arabidopsis-SKP1-like gene family exhibit a variety of expression patterns and may play diverse roles in Arabidopsis.2003 · DOI: 10.1104/pp.103.024703
The ASK1 and ASK2 genes are essential for Arabidopsis early development.2004 · DOI: 10.1105/tpc.017772

Rice

Reference gene IDPossible functionPapers / DOI
Os11g0456300 Involved in ubiquitination and subsequent proteasomal degradation of target proteins. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006511ubiquitin-dependent protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.595; coverage=104.225; evalue=3.55e-37; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007346regulation of mitotic cell cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.805; coverage=108.451; evalue=3.84e-32; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009733response to auxinBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009734auxin-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009753response to jasmonic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38; UniProt GO evidence=IMP:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009867jasmonic acid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38; UniProt GO evidence=IMP:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016567protein ubiquitinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38; UniProt GO evidence=IEA:UniProtKB-UniPathwayUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031146SCF-dependent proteasomal ubiquitin-dependent protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.0; coverage=112.676; evalue=4.04e-32; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019005SCF ubiquitin ligase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.455; coverage=108.451; evalue=1.16e-35; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0097602cullin family protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G20140KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.0; coverage=112.676; evalue=4.04e-32UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G21850KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.805; coverage=108.451; evalue=3.84e-32UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G21860KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.455; coverage=108.451; evalue=1.16e-35UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G34210KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.27; coverage=104.225; evalue=5.76e-38UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G34470KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.595; coverage=104.225; evalue=3.55e-37UniProtKB/Swiss-Prot DAT 2026 current_release