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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G358090
Query referenceTK1151
LocationChr03:88329863-88332773 (-)
DescriptionSimilar to MTERF4: Transcription termination factor MTERF4%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_010514 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g21710 Transcription termination factor involved in processing of plastid transcripts (By similarity). No verified direct reference in this release
At2g03050 Transcription termination factor required for plastid- specific rRNA accumulation and protein synthesis in plastids.
A mutation in the Arabidopsis mTERF-related plastid protein SOLDAT10 activates retrograde signaling and suppresses (1)O(2)-induced cell death.2009 · DOI: 10.1111/j.1365-313x.2009.03965.x
At4g02990 Transcription termination factor required for processing and steady-state levels of plastid transcripts. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006353DNA-templated transcription terminationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008380RNA splicingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009793embryo development ending in seed dormancyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032502developmental processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042254ribosome biogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.118; coverage=83.333; evalue=3.18e-149; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042793plastid transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042794plastid rRNA transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.562; coverage=62.745; evalue=7.55e-37; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009570chloroplast stromaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.118; coverage=83.333; evalue=3.18e-149; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003676nucleic acid bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.118; coverage=83.333; evalue=3.18e-149; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G21710KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.562; coverage=62.745; evalue=7.55e-37UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G02990KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.987; coverage=76.667; evalue=1.23e-152UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os05g0404000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.197; coverage=76.667; evalue=4.77e-149UniProtKB/Swiss-Prot DAT 2026 current_release