Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G159440 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:40430898-40434936 (+) |
| Description | Similar to AKRP: Ankyrin repeat domain-containing protein%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_007338 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 17 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g66055 |
Involved in the initial differentiation of the proplastid during the embryo development and in plastid differentiation linked to cell differentiation, morphogenesis and organogenesis during the plant life cycle. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030307 | positive regulation of cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031398 | positive regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043409 | negative regulation of MAPK cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045737 | positive regulation of cyclin-dependent protein serine/threonine kinase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070682 | proteasome regulatory particle assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000502 | proteasome complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.095; coverage=99.326; evalue=3.31e-142; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005856 | cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008540 | proteasome regulatory particle, base subcomplex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.095; coverage=99.326; evalue=3.31e-142; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061629 | RNA polymerase II-specific DNA-binding transcription factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140693 | molecular condensate scaffold activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.095; coverage=99.326; evalue=3.31e-142; UniProt GO evidence=IDA:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G40160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.995; coverage=46.517; evalue=7.9e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G66055 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.095; coverage=99.326; evalue=3.31e-142 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:5716 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.406; coverage=31.011; evalue=1.06e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:116722 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.681; coverage=31.011; evalue=4.92e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release |