Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA03G152250`
Query reference	TK1151
Location	Chr03:38654611-38657597 (-)
Description	Similar to MCA1: Protein MID1-COMPLEMENTING ACTIVITY 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_007303 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g35920`	Calcium-permeable stretch-activated channel component.	Arabidopsis plasma membrane protein crucial for Ca2+ influx and touch sensing in roots.2007 · DOI: 10.1073/pnas.0607703104 MCA1 and MCA2 that mediate Ca2+ uptake have distinct and overlapping roles in Arabidopsis.2010 · DOI: 10.1104/pp.109.147371
`At2g17780`	Calcium-permeable stretch-activated channel component.	MCA1 and MCA2 that mediate Ca2+ uptake have distinct and overlapping roles in Arabidopsis.2010 · DOI: 10.1104/pp.109.147371

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006816	calcium ion transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.648; coverage=102.67; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006979	response to oxidative stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=26.699; evalue=2e-11; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007166	cell surface receptor signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.648; coverage=102.67; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007231	osmosensory signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.648; coverage=102.67; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0033500	carbohydrate homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.648; coverage=102.67; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048528	post-embryonic root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.386; coverage=100.728; evalue=4.19e-166; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071260	cellular response to mechanical stimulus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.648; coverage=102.67; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.648; coverage=102.67; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=26.699; evalue=2e-11; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.648; coverage=102.67; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.08; coverage=105.583; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005262	calcium channel activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.648; coverage=102.67; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G14870	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=26.699; evalue=2e-11	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G17780	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.386; coverage=100.728; evalue=4.19e-166	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G35920	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.648; coverage=102.67; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G35525	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.862; coverage=26.456; evalue=1.06e-10	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	zma:100192784	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.08; coverage=105.583; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release