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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G010230
Query referenceTK1151
LocationChr03:2530308-2543847 (+)
DescriptionSimilar to RST1: Protein RST1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_006113 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 13 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g27670 Involved in cuticular wax formation.
Mutation of the RESURRECTION1 locus of Arabidopsis reveals an association of cuticular wax with embryo development.2005 · DOI: 10.1104/pp.105.066753
The Arabidopsis RESURRECTION1 gene regulates a novel antagonistic interaction in plant defense to biotrophs and necrotrophs.2009 · DOI: 10.1104/pp.109.142158
A genetics screen highlights emerging roles for CPL3, RST1 and URT1 in RNA metabolism and silencing.2019 · DOI: 10.1038/s41477-019-0419-7
RST1 Is a FREE1 Suppressor That Negatively Regulates Vacuolar Trafficking in Arabidopsis.2019 · DOI: 10.1105/tpc.19.00003
RST1 and RIPR connect the cytosolic RNA exosome to the Ski complex in Arabidopsis.2019 · DOI: 10.1038/s41467-019-11807-4

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006629lipid metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009793embryo development ending in seed dormancyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010143cutin biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043447alkane biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048316seed developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060147regulation of post-transcriptional gene silencingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.156; coverage=18.514; evalue=1.86e-09; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1900369negative regulation of post-transcriptional gene silencing by regulatory ncRNABiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005925focal adhesionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.156; coverage=18.514; evalue=1.86e-09; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G27670KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.146; coverage=102.827; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdre:100150998KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.0; coverage=14.412; evalue=4.26e-08UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:54914KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.277; coverage=22.395; evalue=3.24e-09UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:230393KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.156; coverage=18.514; evalue=1.86e-09UniProtKB/Swiss-Prot DAT 2026 current_release