基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA02G501020 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr02:128376863-128380151 (-) |
| 描述 | Similar to LYK3: LysM domain receptor-like kinase 3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_008393 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 31 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g51940 |
假定的赖氨酸结构域(LysM)受体激酶,可能识别微生物来源的含N-乙酰氨基葡萄糖(NAG)的配体。 | 暂无已核实直接文献 |
At3g21630 |
含LysM结构域的受体样激酶,参与几丁质及几丁寡糖介导的信号转导和先天免疫,并参与对盐胁迫、重金属及灰葡萄孢菌(Botrytis cinerea)的抗性。 |
CERK1, a LysM receptor kinase, is essential for chitin elicitor signaling in Arabidopsis.2007 · DOI: 10.1073/pnas.0705147104 AvrPtoB targets the LysM receptor kinase CERK1 to promote bacterial virulence on plants.2009 · DOI: 10.1016/j.cub.2009.01.054 The lysin motif receptor-like kinase (LysM-RLK) CERK1 is a major chitin-binding protein in Arabidopsis thaliana and subject to chitin-induced phosphorylation.2010 · DOI: 10.1074/jbc.m110.116657 Arabidopsis lysin-motif proteins LYM1 LYM3 CERK1 mediate bacterial peptidoglycan sensing and immunity to bacterial infection.2011 · DOI: 10.1073/pnas.1112862108 The LysM receptor-like kinase LysM RLK1 is required to activate defense and abiotic-stress responses induced by overexpression of fungal chitinases in Arabidopsis plants.2012 · DOI: 10.1093/mp/sss021
|
水稻
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002752 | cell surface pattern recognition receptor signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002758 | innate immune response-activating signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=47.866; 覆盖度=48.955; E 值=3.49e-93; UniProt GO evidence=EXP:PHI-base | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006468 | protein phosphorylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009738 | abscisic acid-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009789 | positive regulation of abscisic acid-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010200 | response to chitin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031348 | negative regulation of defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032491 | detection of molecule of fungal origin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032499 | detection of peptidoglycan | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035556 | intracellular signal transduction | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046777 | protein autophosphorylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071219 | cellular response to molecule of bacterial origin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071323 | cellular response to chitin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=47.866; 覆盖度=48.955; E 值=3.49e-93; UniProt GO evidence=IDA:PHI-base | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008061 | chitin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.561; 覆盖度=48.955; E 值=2.62e-93; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016301 | kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019199 | transmembrane receptor protein kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.561; 覆盖度=48.955; E 值=2.62e-93; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001080 | chitosan binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G51940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.325; 覆盖度=96.418; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G21630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.112; 覆盖度=95.821; E 值=4.51e-87 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0538300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=47.866; 覆盖度=48.955; E 值=3.49e-93 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os09g0511000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.673; 覆盖度=87.761; E 值=1.62e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:9270778 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.673; 覆盖度=87.761; E 值=1.62e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release |