Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G483470 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:123385481-123386656 (-) |
| Description | Similar to SHR: Protein SHORT-ROOT (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_013626 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 15 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g37650 |
Transcription factor required for quiescent center cells specification and maintenance of surrounding stem cells, and for the asymmetric cell division involved in radial pattern formation in roots. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: A2YN56 |
Transcription factor required for the asymmetric cell division involved in radial pattern formation in roots. | No verified direct reference in this release |
Os07g0586900 |
Transcription factor required for the asymmetric cell division involved in radial pattern formation in roots. | No verified direct reference in this release |
Os03g0433200 |
Putative transcription factor involved in asymmetric cell division. | No verified direct reference in this release |
UniProt: A2XIA8 |
Putative transcription factor involved in asymmetric cell division. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008356 | asymmetric cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009956 | radial pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032350 | regulation of hormone metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=NAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045930 | negative regulation of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060586 | multicellular organismal-level iron ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055037 | recycling endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G04890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.414; coverage=73.462; evalue=1.74e-50 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G49950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.458; coverage=75.192; evalue=1.24e-50 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G37650 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.685; coverage=96.346; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0586900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.369; coverage=79.231; evalue=1.17e-142 | UniProtKB/Swiss-Prot DAT 2026 current_release |