Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G438440 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:111386295-111387963 (+) |
| Description | Similar to VPS35B: Vacuolar protein sorting-associated protein 35B (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_024679 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 43 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g75850 |
Plays a role in vesicular protein sorting. | |
At3g51310 |
Plays a role in vesicular protein sorting. | No verified direct reference in this release |
At2g17790 |
Plays a role in vesicular protein sorting. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006624 | vacuolar protein processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.619; coverage=99.621; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007040 | lysosome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010629 | negative regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010821 | regulation of mitochondrion organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031647 | regulation of protein stability | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031648 | protein destabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032456 | endocytic recycling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032463 | negative regulation of protein homooligomerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036010 | protein localization to endosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042147 | retrograde transport, endosome to Golgi | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.619; coverage=99.621; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045056 | transcytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045732 | positive regulation of protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051246 | regulation of protein metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061357 | positive regulation of Wnt protein secretion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090141 | positive regulation of mitochondrial fission | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090263 | positive regulation of canonical Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IGI:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098887 | neurotransmitter receptor transport, endosome to postsynaptic membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IDA:SynGO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099074 | mitochondrion to lysosome vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099639 | neurotransmitter receptor transport, endosome to plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902823 | negative regulation of late endosome to lysosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903181 | positive regulation of dopamine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903828 | negative regulation of protein localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904377 | positive regulation of protein localization to cell periphery | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905166 | negative regulation of lysosomal protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.863; coverage=99.747; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.253; coverage=100.126; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005764 | lysosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.619; coverage=99.621; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005771 | multivesicular body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.863; coverage=99.747; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.619; coverage=99.621; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.619; coverage=99.621; evalue=0.0; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.619; coverage=99.621; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.863; coverage=99.747; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030904 | retromer complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.619; coverage=99.621; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030906 | retromer, cargo-selective complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.619; coverage=99.621; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097422 | tubular endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099073 | mitochondrion-derived vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031748 | D1 dopamine receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0; UniProt GO evidence=IPI:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G75850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.619; coverage=99.621; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G17790 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.253; coverage=100.126; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G51310 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.863; coverage=99.747; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:521864 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.609; coverage=100.885; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:65114 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.955; coverage=100.379; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |