Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G412790 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:104984651-104988251 (-) |
| Description | Similar to HMGB15: High mobility group B protein 15 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014562 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 36 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g04880 |
Binds preferentially DNA with A/T-rich content. | No verified direct reference in this release |
At1g76110 |
Binds preferentially DNA with A/T-rich content. | |
At3g13350 |
Binds preferentially DNA with A/T-rich content. | No verified direct reference in this release |
At1g55650 |
Binds preferentially DNA with A/T-rich content. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000741 | karyogamy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.087; coverage=59.013; evalue=5.29e-75; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006337 | nucleosome disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008285 | negative regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009846 | pollen germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009860 | pollen tube growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010197 | polar nucleus fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.087; coverage=59.013; evalue=5.29e-75; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019760 | glucosinolate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030071 | regulation of mitotic metaphase/anaphase transition | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030336 | negative regulation of cell migration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042592 | homeostatic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045597 | positive regulation of cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070316 | regulation of G0 to G1 transition | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905168 | positive regulation of double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000045 | regulation of G1/S transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000781 | positive regulation of double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000819 | regulation of nucleotide-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000776 | kinetochore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005667 | transcription regulator complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016363 | nuclear matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016514 | SWI/SNF complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035060 | brahma complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090406 | pollen tube | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000400 | four-way junction DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G04880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.82; coverage=69.45; evalue=1.57e-103 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G55650 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.908; coverage=55.598; evalue=7.03e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G76110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.087; coverage=59.013; evalue=5.29e-75 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G13350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.377; coverage=57.306; evalue=5.07e-79 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:77044 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.727; coverage=16.698; evalue=8.04e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release |