基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA02G406990 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr02:103496250-103499742 (+) |
| 描述 | Similar to VIP5: Protein RTF1 homolog (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_014635 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 17 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g61040 |
PAF1复合物(PAF1C)的组分,参与组蛋白修饰,如组蛋白H3第4位赖氨酸的甲基化(H3K4me3)。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.0; 覆盖度=54.81; E 值=3.05e-22; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006325 | chromatin organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.0; 覆盖度=54.81; E 值=3.05e-22; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.429; 覆盖度=95.044; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006368 | transcription elongation by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.48; 覆盖度=50.437; E 值=1.46e-23; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.429; 覆盖度=95.044; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009910 | negative regulation of flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.429; 覆盖度=95.044; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016055 | Wnt signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.0; 覆盖度=54.81; E 值=3.05e-22; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019827 | stem cell population maintenance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.0; 覆盖度=54.81; E 值=3.05e-22; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.429; 覆盖度=95.044; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.429; 覆盖度=95.044; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.0; 覆盖度=54.81; E 值=3.05e-22; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.0; 覆盖度=54.81; E 值=3.05e-22; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016593 | Cdc73/Paf1 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.429; 覆盖度=95.044; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.429; 覆盖度=95.044; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.0; 覆盖度=54.81; E 值=3.05e-22; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.0; 覆盖度=54.81; E 值=3.05e-22; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990269 | RNA polymerase II C-terminal domain phosphoserine binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.429; 覆盖度=95.044; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G61040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.429; 覆盖度=95.044; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_F25B3.6 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.48; 覆盖度=50.437; E 值=1.46e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:23168 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.0; 覆盖度=54.81; E 值=3.05e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:76246 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=25.0; 覆盖度=54.81; E 值=5.34e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release |