Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA02G174710`
Query reference	TK1151
Location	Chr02:44996388-44999747 (-)
Description	Similar to NHX4: Sodium/hydrogen exchanger 4 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_016203 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 26 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g55470`	May act in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes.	No verified direct reference in this release
`At5g27150`	Acts in low affinity electroneutral exchange of protons for cations such as Na⁺ or K⁺ across membranes.	Salt tolerance conferred by overexpression of a vacuolar Na+/H+ antiport in Arabidopsis.1999 · DOI: 10.1126/science.285.5431.1256 Functional conservation between yeast and plant endosomal Na(+)/H(+) antiporters.2000 · DOI: 10.1016/s0014-5793(00)01412-5 Arabidopsis thaliana and Saccharomyces cerevisiae NHX1 genes encode amiloride sensitive electroneutral Na+/H+ exchangers.2000 · DOI: 10.1042/0264-6021:3510241 Engineering salt-tolerant Brassica plants: characterization of yield and seed oil quality in transgenic plants with increased vacuolar sodium accumulation.2001 · DOI: 10.1073/pnas.231476498 The arabidopsis Na+/H+ exchanger AtNHX1 catalyzes low affinity Na+ and K+ transport in reconstituted liposomes.2002 · DOI: 10.1074/jbc.m105043200 Vacuolar cation/H+ exchange, ion homeostasis, and leaf development are altered in a T-DNA insertional mutant of AtNHX1, the Arabidopsis vacuolar Na+/H+ antiporter.2003 · DOI: 10.1046/j.1365-313x.2003.01871.x Expression of an Arabidopsis vacuolar sodium/proton antiporter gene in cotton improves photosynthetic performance under salt conditions and increases fiber yield in the field.2005 · DOI: 10.1093/pcp/pci201 The Arabidopsis thaliana proton transporters, AtNhx1 and Avp1, can function in cation detoxification in yeast.1999 · DOI: 10.1073/pnas.96.4.1480
`At3g05030`	Acts in low affinity electroneutral exchange of protons for cations such as Na⁺ or K⁺ across membranes.	Differential expression and function of Arabidopsis thaliana NHX Na+/H+ antiporters in the salt stress response.2002 · DOI: 10.1046/j.1365-313x.2002.01309.x
`At3g06370`	May act in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes.	No verified direct reference in this release

Rice

Reference gene ID	Possible function	Papers / DOI
`Os07g0666900`	May act as a vacuolar antiporter mediating low-affinity electroneutral exchange of H⁺ for cations such as Na⁺ and K⁺.	Function, intracellular localization and the importance in salt tolerance of a vacuolar Na(+)/H(+) antiporter from rice.2004 · DOI: 10.1093/pcp/pch014

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006814	sodium ion transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=IC:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0034486	vacuolar transmembrane transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.915; coverage=96.462; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048366	leaf development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051453	regulation of intracellular pH	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0055075	potassium ion homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071805	potassium ion transmembrane transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090333	regulation of stomatal closure	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.306; coverage=98.138; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0098719	sodium ion import across plasma membrane	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901002	positive regulation of response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.915; coverage=96.462; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990573	potassium ion import across plasma membrane	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.306; coverage=98.138; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000139	Golgi membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000325	plant-type vacuole	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005576	extracellular region	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.306; coverage=98.138; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005773	vacuole	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005774	vacuolar membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.306; coverage=98.138; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.67; coverage=82.309; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005516	calmodulin binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015081	sodium ion transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015385	sodium:proton antiporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015386	potassium:proton antiporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G05030	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.306; coverage=98.138; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G06370	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.67; coverage=82.309; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G27150	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.524; coverage=97.765; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G55470	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.168; coverage=99.628; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os07g0666900	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.915; coverage=96.462; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4344217	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.915; coverage=96.462; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release