基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA02G032080 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr02:7776144-7782307 (+) |
| 描述 | Similar to rhp16: ATP-dependent helicase rhp16 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_017552 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g50410 |
可能参与转录基因沉默的解旋酶样转录因子。 | |
At5g43530 |
具有内在的依赖 ATP 的核小体重塑活性。 | |
At5g22750 |
在无差错复制后 DNA 修复或 DNA 损伤耐受 途径中发挥作用。 |
A homolog of ScRAD5 is involved in DNA repair and homologous recombination in Arabidopsis.2008 · DOI: 10.1104/pp.108.116806 RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana.2010 · DOI: 10.1105/tpc.110.078568
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000715 | nucleotide-excision repair, DNA damage recognition | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.242; 覆盖度=55.681; E 值=1.09e-141; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000720 | pyrimidine dimer repair by nucleotide-excision repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.663; 覆盖度=100.112; E 值=2.5e-94; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006289 | nucleotide-excision repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.663; 覆盖度=100.112; E 值=2.5e-94; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.242; 覆盖度=55.681; E 值=1.09e-141; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008104 | intracellular protein localization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.242; 覆盖度=55.681; E 值=1.09e-141; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009411 | response to UV | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.242; 覆盖度=55.681; E 值=1.09e-141; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034644 | cellular response to UV | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.242; 覆盖度=55.681; E 值=1.09e-141; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070911 | global genome nucleotide-excision repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.242; 覆盖度=55.681; E 值=1.09e-141; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080188 | gene silencing by siRNA-directed DNA methylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.663; 覆盖度=100.112; E 值=2.5e-94; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000113 | nucleotide-excision repair factor 4 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=IPI:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031463 | Cul3-RING ubiquitin ligase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.242; 覆盖度=55.681; E 值=1.09e-141; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004386 | helicase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=ISM:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008094 | ATP-dependent activity, acting on DNA | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=ISM:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.242; 覆盖度=55.681; E 值=1.09e-141; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=ISM:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140658 | ATP-dependent chromatin remodeler activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153; UniProt GO evidence=NAS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G20010 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.663; 覆盖度=100.112; E 值=2.5e-94 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YBR114W | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.242; 覆盖度=55.681; E 值=1.09e-141 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2538860 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.465; 覆盖度=55.456; E 值=1.36e-153 | UniProtKB/Swiss-Prot DAT 2026 current_release |