Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G640400 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:162066942-162079219 (+) |
| Description | Similar to SIEL: Protein SIEL (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_000038 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 16 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g08800 |
Intracellular shuttle that promotes movement of SHR from the stele into the endodermis. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0010496 | intercellular transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.233; coverage=110.92; evalue=4.05e-163; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016180 | snRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23; UniProt GO evidence=IDA:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034243 | regulation of transcription elongation by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034472 | snRNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.233; coverage=110.92; evalue=4.05e-163; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090057 | root radial pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.233; coverage=110.92; evalue=4.05e-163; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160240 | RNA polymerase II transcription initiation surveillance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.233; coverage=110.92; evalue=4.05e-163; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.233; coverage=110.92; evalue=4.05e-163; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005938 | cell cortex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.233; coverage=110.92; evalue=4.05e-163; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032039 | integrator complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160232 | INTAC complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000822 | inositol hexakisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.129; coverage=35.632; evalue=2.66e-19; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G08800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.233; coverage=110.92; evalue=4.05e-163 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG12113 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.129; coverage=35.632; evalue=2.66e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:92105 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.829; coverage=42.414; evalue=3.84e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:101861 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.829; coverage=42.414; evalue=2.36e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:447293 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.871; coverage=46.207; evalue=6.75e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release |