基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G617320 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:155743685-155749355 (+) |
| 描述 | Similar to VLN2: Villin-2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_000366 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 21 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g57410 |
结合肌动蛋白及其丝束不依赖 Ca²⁺,但切断肌动蛋白丝依赖钙离子。 |
Arabidopsis VILLIN1 and VILLIN3 have overlapping and distinct activities in actin bundle formation and turnover.2010 · DOI: 10.1105/tpc.110.076240
|
At2g41740 |
可能作为受 Ca²⁺ 调控的肌动蛋白结合蛋白。 |
Arabidopsis VILLIN2 and VILLIN3 are required for the generation of thick actin filament bundles and for directional organ growth.2012 · DOI: 10.1104/pp.111.192385
|
At4g30160 |
结合肌动蛋白及其丝束不依赖 Ca²⁺,但可封闭肌动蛋白丝正端并以钙依赖方式切断丝状结构。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0356700 |
Ca²⁺调控的肌动蛋白结合蛋白(根据相似性)。 | |
Os08g0240800 |
Ca²⁺调控的肌动蛋白结合蛋白(根据相似性)。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0001558 | regulation of cell growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.321; 覆盖度=106.297; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007015 | actin filament organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.321; 覆盖度=106.297; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009630 | gravitropism | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.321; 覆盖度=106.297; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.321; 覆盖度=106.297; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030042 | actin filament depolymerization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=43.644; 覆盖度=106.617; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048767 | root hair elongation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=43.644; 覆盖度=106.617; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051014 | actin filament severing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.688; 覆盖度=106.19; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051017 | actin filament bundle assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.688; 覆盖度=106.19; E 值=0.0; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051693 | actin filament capping | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.688; 覆盖度=106.19; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051764 | actin crosslink formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=43.644; 覆盖度=106.617; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099636 | cytoplasmic streaming | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=43.644; 覆盖度=106.617; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000012 | regulation of auxin polar transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.321; 覆盖度=106.297; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=43.644; 覆盖度=106.617; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.688; 覆盖度=106.19; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.688; 覆盖度=106.19; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005884 | actin filament | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.491; 覆盖度=105.229; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=43.644; 覆盖度=106.617; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015629 | actin cytoskeleton | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.688; 覆盖度=106.19; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032432 | actin filament bundle | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.321; 覆盖度=106.297; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.688; 覆盖度=106.19; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051015 | actin filament binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.688; 覆盖度=106.19; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G41740 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.688; 覆盖度=106.19; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G57410 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.491; 覆盖度=105.229; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G30160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=43.644; 覆盖度=106.617; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G57320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=41.236; 覆盖度=105.336; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0356700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.321; 覆盖度=106.297; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |