基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G593370 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:149379285-149379800 (+) |
| 描述 | Similar to OTU6: OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_004720 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 34 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g27350 |
水解酶,可在体外从蛋白质上移除结合的泛素,因此可能通过防止降解在蛋白质周转水平上发挥重要调控作用。 |
Involvement of KDM1C histone demethylase-OTLD1 otubain-like histone deubiquitinase complexes in plant gene repression.2011 · DOI: 10.1073/pnas.1014030108 Distinct phylogenetic relationships and biochemical properties of Arabidopsis ovarian tumor-related deubiquitinases support their functional differentiation.2014 · DOI: 10.3389/fpls.2014.00084
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0001817 | regulation of cytokine production | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006508 | proteolysis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009966 | regulation of signal transduction | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010629 | negative regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016579 | protein deubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=40.996; 覆盖度=53.157; E 值=9.24e-63; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031647 | regulation of protein stability | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=40.996; 覆盖度=53.157; E 值=9.24e-63; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032496 | response to lipopolysaccharide | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032700 | negative regulation of interleukin-17 production | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=40.996; 覆盖度=53.157; E 值=9.24e-63; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040029 | epigenetic regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=40.996; 覆盖度=53.157; E 值=9.24e-63; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045814 | negative regulation of gene expression, epigenetic | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045927 | positive regulation of growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050776 | regulation of immune response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051241 | negative regulation of multicellular organismal process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070536 | protein K63-linked deubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071108 | protein K48-linked deubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090090 | negative regulation of canonical Wnt signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902275 | regulation of chromatin organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904263 | positive regulation of TORC1 signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904515 | positive regulation of TORC2 signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004843 | cysteine-type deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031491 | nucleosome binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042393 | histone binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061578 | K63-linked deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0101005 | deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=40.996; 覆盖度=53.157; E 值=9.24e-63; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140934 | histone deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990380 | K48-linked deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=40.996; 覆盖度=53.157; E 值=9.24e-63; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G27350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.164; 覆盖度=76.986; E 值=8.83e-178 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:555459 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.562; 覆盖度=49.287; E 值=5.56e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:54644 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=40.996; 覆盖度=53.157; E 值=9.24e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:363452 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.996; 覆盖度=53.157; E 值=1.02e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:448134 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.909; 覆盖度=56.008; E 值=6.02e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release |