RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDTkA01G591800
Query referenceTK1151
LocationChr01:148945759-148954409 (+)
DescriptionSimilar to 26S proteasome regulatory subunit 6B homolog (Helianthus annuus OX%3D4232)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000720 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 18 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g58290 The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins.
A mutation in the Proteosomal Regulatory Particle AAA-ATPase-3 in Arabidopsis impairs the light-specific hypocotyl elongation response elicited by a glutamate receptor agonist, BMAA.2009 · DOI: 10.1007/s11103-009-9489-7

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006511ubiquitin-dependent protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.954; coverage=65.65; evalue=0.0; UniProt GO evidence=TAS:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010498proteasomal protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=78.392; coverage=63.884; evalue=0.0; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043161proteasome-mediated ubiquitin-dependent protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.954; coverage=65.65; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000502proteasome complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.954; coverage=65.65; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=96.164; coverage=62.761; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=78.392; coverage=63.884; evalue=0.0; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=96.164; coverage=62.761; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=78.392; coverage=63.884; evalue=0.0; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008540proteasome regulatory particle, base subcomplexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=96.164; coverage=62.761; evalue=0.0; UniProt GO evidence=IEA:EnsemblPlantsUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009505plant-type cell wallCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.954; coverage=65.65; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.954; coverage=65.65; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.954; coverage=65.65; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016234inclusion bodyCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=78.392; coverage=63.884; evalue=0.0; UniProt GO evidence=IDA:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0022624proteasome accessory complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=78.392; coverage=63.884; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031597cytosolic proteasome complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=78.392; coverage=63.884; evalue=0.0; UniProt GO evidence=IDA:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=96.164; coverage=62.761; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016887ATP hydrolysis activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=96.164; coverage=62.761; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0036402proteasome-activating activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.954; coverage=65.65; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G58290KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.954; coverage=65.65; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhan:110873361KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=96.164; coverage=62.761; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrno:117262KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=78.392; coverage=63.884; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsot:102577768KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=91.304; coverage=66.453; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release