基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G497220 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:124455077-124457579 (-) |
| 描述 | Similar to TCP4: Transcription factor TCP4 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_001936 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g15030 |
转录因子可能通过 miRNA的诱导,负向调节边界特异性基因的表达,在茎器官形态发生的控制中发挥关键作用。 |
Activation of YUCCA5 by the Transcription Factor TCP4 Integrates Developmental and Environmental Signals to Promote Hypocotyl Elongation in Arabidopsis.2016 · DOI: 10.1105/tpc.16.00360 TCP4-dependent induction of CONSTANS transcription requires GIGANTEA in photoperiodic flowering in Arabidopsis.2017 · DOI: 10.1371/journal.pgen.1006856 The TCP4 transcription factor regulates trichome cell differentiation by directly activating GLABROUS INFLORESCENCE STEMS in Arabidopsis thaliana.2018 · DOI: 10.1111/tpj.13772
|
At1g53230 |
通过负调节边界特异性基因的表达,可能通过 miRNA的诱导,在茎器官形态发生的控制中发挥关键作用。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os01g0213800 |
转录激活剂。 | 暂无已核实直接文献 |
UniProt: A2WM14 |
转录激活剂。 | 暂无已核实直接文献 |
UniProt: A2WV68 |
转录激活剂。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.351; 覆盖度=60.0; E 值=6.16e-78; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009965 | leaf morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048825 | cotyledon development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048826 | cotyledon morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000032 | regulation of secondary shoot formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=43.233; 覆盖度=47.928; E 值=1.14e-47; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001216 | DNA-binding transcription activator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990837 | sequence-specific double-stranded DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G53230 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.351; 覆盖度=60.0; E 值=6.16e-78 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G31070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=43.233; 覆盖度=47.928; E 值=1.14e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G15030 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.252; 覆盖度=60.0; E 值=3.56e-84 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0213800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=50.307; 覆盖度=58.739; E 值=5.01e-72 | UniProtKB/Swiss-Prot DAT 2026 current_release |