Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G489720 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:122544017-122549962 (+) |
| Description | Similar to brcc3: Lys-63-specific deubiquitinase BRCC36 (Salmo salar OX%3D8030) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_002026 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 17 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006508 | proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007095 | mitotic G2 DNA damage checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010212 | response to ionizing radiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045739 | positive regulation of DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070536 | protein K63-linked deubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140861 | DNA repair-dependent chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000922 | spindle pole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070552 | BRISC complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004843 | cysteine-type deubiquitinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008237 | metallopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031593 | polyubiquitin modification-dependent protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140492 | metal-dependent deubiquitinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | dre:100333845 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.181; coverage=40.786; evalue=1.05e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sasa:100195855 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.181; coverage=40.786; evalue=3e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:549211 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=48.387; coverage=38.084; evalue=9.11e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release |