Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G357240 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:88708059-88709443 (+) |
| Description | Similar to IAA3: Auxin-responsive protein IAA3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_003457 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 9 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g04240 |
Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. |
A genetic framework for the control of cell division and differentiation in the root meristem.2008 · DOI: 10.1126/science.1164147 The rate of cell differentiation controls the Arabidopsis root meristem growth phase.2010 · DOI: 10.1016/j.cub.2010.05.035 Spatio-temporal sequence of cross-regulatory events in root meristem growth.2010 · DOI: 10.1073/pnas.1014716108
|
At5g43700 |
Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.057; coverage=58.148; evalue=6.16e-59; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.229; coverage=61.481; evalue=3.11e-58; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.057; coverage=58.148; evalue=6.16e-59; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.057; coverage=58.148; evalue=6.16e-59; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.057; coverage=58.148; evalue=6.16e-59; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.057; coverage=58.148; evalue=6.16e-59; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.338; coverage=57.037; evalue=3.18e-55; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.057; coverage=58.148; evalue=6.16e-59; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.057; coverage=58.148; evalue=6.16e-59; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G04240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.057; coverage=58.148; evalue=6.16e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G43700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.338; coverage=57.037; evalue=3.18e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release |